RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 GUCY2FP51841 1108 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 TRPC3Q13507 836 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 NCOA4Q13772 614 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 FIGNQ5HY92 759 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 KLHDC7AQ5VTJ3 777 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 DPY19L2P1Q6NXN4 242 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 C1orf127Q8N9H9 656 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 BEST2Q8NFU1 509 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 PI4K2AQ9BTU6 479 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 HTATIP2Q9BUP3 242 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 TTYH3Q9C0H2 523 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 GANQ9H2C0 597 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 DPP3Q9NY33 737 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 PCDH10Q9P2E7 1040 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 UBQLN1Q9UMX0 589 aaKnown RBP19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 FXR1P51114 621 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 POLR2FP61218 127 aaKnown RBP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 GOLGA8FQ08AF8 430 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 GOLGA8DPQ0D2H9 430 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 IKBKEQ14164 716 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 ZBTB6Q15916 424 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 WDR44Q5JSH3 913 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 TMEM130Q8N3G9 435 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 C18orf25Q96B23 403 aaPredicted RBP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 VWCEQ96DN2 955 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 APEX2Q9UBZ4 518 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 TUBGCP4Q9UGJ1 667 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 AKR1B15C9JRZ8 316 aaPredicted RBP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 PTGESO14684 152 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 XPOTO43592 962 aaKnown RBP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 ITGB3P05106 788 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 UCHL3P15374 230 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 ADKP55263 362 aaKnown RBP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 GSDMDP57764 484 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 SCARA3Q6AZY7 606 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 GJB7Q6PEY0 223 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 CACNA2D4Q7Z3S7 1137 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 RPUSD2Q8IZ73 545 aaKnown RBP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 CCDC150Q8NCX0 1101 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 NT5C1BQ96P26 610 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 IMPG2Q9BZV3 1241 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 NLRC4Q9NPP4 1024 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 TMEM161AQ9NX61 479 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 CEP72Q9P209 647 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 SIX4Q9UIU6 781 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 ITGA11Q9UKX5 1188 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 CAPN11Q9UMQ6 739 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 INPP5FQ9Y2H2 1132 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 LUC7L2Q9Y383 392 aaKnown RBP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 FHOD1Q9Y613 1164 aa19.2■□□□□ 0.66
PTCHD3-202ENST00000622555 LTBP2Q14767 1821 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 A0A1W2PQJ5 194 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 RNF225M0QZC1 329 aaPredicted RBP19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 CST3P01034 146 aaPredicted RBP19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 MSNP26038 577 aaKnown RBP19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 SCNN1GP51170 649 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 MYL6P60660 151 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 GSTCDQ8NEC7 633 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 ELMO3Q96BJ8 720 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 PPP1R10Q96QC0 940 aaKnown RBP19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 ELAC1Q9H777 363 aaKnown RBP19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 LRFN2Q9ULH4 789 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 PLAGL2Q9UPG8 496 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 PCDHB7Q9Y5E2 793 aa19.19■□□□□ 0.66
PTCHD3-202ENST00000622555 MKI67P46013 3256 aaKnown RBP19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 EVI5O60447 810 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 MFAP3LO75121 409 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 ZC3H11AO75152 810 aaKnown RBP eCLIP19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 THP07101 528 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 PFKMP08237 780 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 POLR2BP30876 1174 aaKnown RBP19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 AFF1P51825 1210 aaKnown RBP19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 ARID5BQ14865 1188 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 IQCEQ6IPM2 695 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 PHLDB3Q6NSJ2 640 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 GLB1LQ6UWU2 654 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 CNGA4Q8IV77 575 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 ARHGEF19Q8IW93 802 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 ZNF397Q8NF99 534 aaPredicted RBP19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 EDEM3Q9BZQ6 932 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 SLC38A7Q9NVC3 462 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 MIOSQ9NXC5 875 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 SCN1AP35498 2009 aa19.18■□□□□ 0.66
PTCHD3-202ENST00000622555 OFD1O75665 1012 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 ACRP10323 421 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 FGFR1P11362 822 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 KRT9P35527 623 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 NOP14P78316 857 aaKnown RBP19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 RBP5P82980 135 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 ZBED6P86452 979 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 RAPGEF1Q13905 1077 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 SGSM1Q2NKQ1 1148 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 SPOPLQ6IQ16 392 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 RRAGAQ7L523 313 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 PPM1KQ8N3J5 372 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 CXorf38Q8TB03 319 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 HELQQ8TDG4 1101 aa19.17■□□□□ 0.66
PTCHD3-202ENST00000622555 BADQ92934 168 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms