RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 ATP5HO75947 161 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 PSMG1O95456 288 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 MAGEA10P43363 369 aaPredicted RBP23.07■■□□□ 1.28
PCSK6-220ENST00000622483 SLC34A1Q06495 639 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 DYNC1I2Q13409 638 aaKnown RBP23.07■■□□□ 1.28
PCSK6-220ENST00000622483 PPP1R21Q6ZMI0 780 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 TTC7BQ86TV6 843 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 C10orf82Q8WW14 230 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 ANAPC5Q9UJX4 755 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 NCANO14594 1321 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 IRS2Q9Y4H2 1338 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 ANKRD62A6NC57 917 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 SLC16A2P36021 539 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 GJC1P36383 396 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 CLNKQ7Z7G1 428 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 GATA6Q92908 595 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 CLPTM1LQ96KA5 538 aa23.07■■□□□ 1.28
PCSK6-220ENST00000622483 MMADHCQ9H3L0 296 aaPredicted RBP23.07■■□□□ 1.28
PCSK6-220ENST00000622483 A0A1W2PPM1 405 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
PCSK6-220ENST00000622483 DMAP1Q9NPF5 467 aaPredicted RBP23.06■■□□□ 1.28
PCSK6-220ENST00000622483 ATP6V1G1O75348 118 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 OR6B1O95007 311 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 ASMTLO95671 621 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 CALCAP01258 141 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 ZBTB16Q05516 673 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 EDRF1Q3B7T1 1238 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 C2CD6Q53TS8 623 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 RINLQ6ZS11 566 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 PTPRN2Q92932 1015 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 HERPUD2Q9BSE4 406 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 STARD13Q9Y3M8 1113 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 EXOC1LA0A1B0GW35 172 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L15C9J2P7 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L13C9JLJ4 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L11C9JVI0 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L18D6R9N7 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L22D6RA61 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L17D6RBQ6 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L19D6RCP7 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L20D6RJB6 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 PFDN1O60925 122 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 CDH16O75309 829 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 STK10O94804 968 aaKnown RBP23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L24Q0WX57 530 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 USP17L6PQ6QN14 398 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 WDR66Q8TBY9 1149 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 SLC5A5Q92911 643 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 GRAMD1AQ96CP6 724 aa23.06■■□□□ 1.28
PCSK6-220ENST00000622483 DIS3Q9Y2L1 958 aaKnown RBP23.06■■□□□ 1.28
PCSK6-220ENST00000622483 OPHN1O60890 802 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 RRM1P23921 792 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 CEP95Q96GE4 821 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 TRABDQ9H4I3 376 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 CHMP2BQ9UQN3 213 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 NMT1P30419 496 aaKnown RBP23.05■■□□□ 1.28
PCSK6-220ENST00000622483 SIX1Q15475 284 aaPredicted RBP23.05■■□□□ 1.28
PCSK6-220ENST00000622483 ANKRD35Q8N283 1001 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 TAB3Q8N5C8 712 aaPredicted RBP23.05■■□□□ 1.28
PCSK6-220ENST00000622483 SNRNP27Q8WVK2 155 aaKnown RBP23.05■■□□□ 1.28
PCSK6-220ENST00000622483 KAT5Q92993 513 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 ABTB1Q969K4 478 aaPredicted RBP23.05■■□□□ 1.28
PCSK6-220ENST00000622483 FAM161BQ96MY7 647 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 ZNF184Q99676 751 aaPredicted RBP23.05■■□□□ 1.28
PCSK6-220ENST00000622483 SPATA16Q9BXB7 569 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 GPR88Q9GZN0 384 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 HEY2Q9UBP5 337 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 ASTN1O14525 1302 aa23.05■■□□□ 1.28
PCSK6-220ENST00000622483 EDF1O60869 148 aaKnown RBP23.04■■□□□ 1.28
PCSK6-220ENST00000622483 ALAS1P13196 640 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 CETN2P41208 172 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 SP8Q8IXZ3 490 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 FAM186BQ8IYM0 893 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 RIBC1Q8N443 379 aaPredicted RBP23.04■■□□□ 1.28
PCSK6-220ENST00000622483 EYA3Q99504 573 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 CLIC5Q9NZA1 410 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 GSC2O15499 205 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 ZSCAN9O15535 394 aaPredicted RBP23.04■■□□□ 1.28
PCSK6-220ENST00000622483 GSTA2P09210 222 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 FASTKD3Q14CZ7 662 aaKnown RBP23.04■■□□□ 1.28
PCSK6-220ENST00000622483 SH3TC2Q8TF17 1288 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 ZNF277Q9NRM2 450 aaPredicted RBP23.04■■□□□ 1.28
PCSK6-220ENST00000622483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.04■■□□□ 1.281e-6■■■■□ 20.3
PCSK6-220ENST00000622483 R3HDM2Q9Y2K5 976 aaKnown RBP23.04■■□□□ 1.28
PCSK6-220ENST00000622483 FAM163BP0C2L3 166 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 SPARCL1Q14515 664 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 PHLDB3Q6NSJ2 640 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 CYFIP1Q7L576 1253 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 FBXO27Q8NI29 283 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 TIPINQ9BVW5 301 aa23.04■■□□□ 1.28
PCSK6-220ENST00000622483 RAD17O75943 681 aa23.03■■□□□ 1.28
PCSK6-220ENST00000622483 EYA4O95677 639 aa23.03■■□□□ 1.28
PCSK6-220ENST00000622483 ATF2P15336 505 aa23.03■■□□□ 1.28
PCSK6-220ENST00000622483 MAPK6Q16659 721 aa23.03■■□□□ 1.28
PCSK6-220ENST00000622483 LVRNQ6Q4G3 990 aa23.03■■□□□ 1.28
PCSK6-220ENST00000622483 CALUO43852 315 aaPredicted RBP23.03■■□□□ 1.28
PCSK6-220ENST00000622483 SERPINB3P29508 390 aa23.03■■□□□ 1.28
PCSK6-220ENST00000622483 ALDH1B1P30837 517 aa23.03■■□□□ 1.28
PCSK6-220ENST00000622483 BPIFB4P59827 614 aa23.03■■□□□ 1.28
PCSK6-220ENST00000622483 CACNA1SQ13698 1873 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms