RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CNDP1Q96KN2 507 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 MMTAG2Q9BU76 263 aaKnown RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 SLITRK6Q9H5Y7 841 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 PSD3Q9NYI0 1048 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 PRG3Q9Y2Y8 225 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-210ENST00000621266 IPPQ9Y573 584 aa10.4□□□□□ -0.74
COL4A6-210ENST00000621266 PTCH1Q13635 1447 aa10.4□□□□□ -0.75
COL4A6-210ENST00000621266 NQO1P15559 274 aaKnown RBP10.4□□□□□ -0.75
COL4A6-210ENST00000621266 LRRC74AQ0VAA2 488 aa10.4□□□□□ -0.75
COL4A6-210ENST00000621266 LRIG3Q6UXM1 1119 aa10.4□□□□□ -0.75
COL4A6-210ENST00000621266 APLFQ8IW19 511 aaPredicted RBP10.4□□□□□ -0.75
COL4A6-210ENST00000621266 DDI1Q8WTU0 396 aa10.4□□□□□ -0.75
COL4A6-210ENST00000621266 ZIM3Q96PE6 472 aa10.4□□□□□ -0.75
COL4A6-210ENST00000621266 MMP19Q99542 508 aa10.4□□□□□ -0.75
COL4A6-210ENST00000621266 ZNF212Q9UDV6 495 aa10.4□□□□□ -0.75
COL4A6-210ENST00000621266 PPARGP37231 505 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 ROR1Q01973 937 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 MKRN4PQ13434 485 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 STAT4Q14765 748 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 MFSD14CQ5VZR4 134 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 DDX18Q9NVP1 670 aaKnown RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 SMARCAL1Q9NZC9 954 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 AP4S1Q9Y587 144 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 ZNF233A6NK53 670 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 TSPAN9O75954 239 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 DDHD2O94830 711 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 ARIH2O95376 493 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PDAP1Q13442 181 aaKnown RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 ARL13BQ3SXY8 428 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 AKIRIN2Q53H80 203 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 TTC13Q8NBP0 860 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PARVBQ9HBI1 364 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 CYP26B1Q9NR63 512 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PI4KBQ9UBF8 816 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 ADD3Q9UEY8 706 aaKnown RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 CYP2D7A0A087X1C5 515 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 TAF4O00268 1085 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 FKBP9O95302 570 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 TFRCP02786 760 aaKnown RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 NT5C2P49902 561 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PSMC6P62333 389 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PWP1Q13610 501 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 TFDP1Q14186 410 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 MAPK11Q15759 364 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 FKBP9P1Q75LS8 142 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 SLC17A8Q8NDX2 589 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 SGSM3Q96HU1 749 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 FAM49AQ9H0Q0 323 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 RAVER2Q9HCJ3 691 aaKnown RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PTPRMP28827 1452 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 LOC100653049A0A140TA62 436 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 UBA6A0AVT1 1052 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 KRT34O76011 436 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 ALBP02768 609 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PYGMP11217 842 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PRCPP42785 496 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 AHI1Q8N157 1196 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 LINC00116Q8NCU8 138 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 CMTM5Q96DZ9 223 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 SHCBP1LQ9BZQ2 653 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 TRIM45Q9H8W5 580 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 CNOT7Q9UIV1 285 aaKnown RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 CLTCL1P53675 1640 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 BMP3P12645 472 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 OASLQ15646 514 aaKnown RBP10.39□□□□□ -0.75
COL4A6-210ENST00000621266 C17orf80Q9BSJ5 609 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 HAO1Q9UJM8 370 aa10.39□□□□□ -0.75
COL4A6-210ENST00000621266 PCP4L1A6NKN8 68 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SH2B2O14492 632 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 ATP9AO75110 1047 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SOX6P35712 828 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 DHX34Q14147 1143 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 ARMCX4Q5H9R4 360 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 P3H2Q8IVL5 708 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 LRRC39Q96DD0 335 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 PIH1D3Q9NQM4 214 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 RPAP1Q9BWH6 1393 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 ZNF839A8K0R7 811 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 ASAP2O43150 1006 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 FAM107AO95990 144 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SCARF1Q14162 830 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 CCNI2Q6ZMN8 369 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 METTL23Q86XA0 190 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SIRT2Q8IXJ6 389 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 OTUB1Q96FW1 271 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 CEP170P1Q96L14 293 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 C11orf70Q9BRQ4 267 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 TTC26A0AVF1 554 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 TMEM120BA0PK00 339 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 CCDC78A2IDD5 438 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 KRT16P08779 473 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 INAQ16352 499 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 C6orf10Q5SRN2 563 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SMG5Q9UPR3 1016 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 RNF17Q9BXT8 1623 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms