RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 GJA8P48165 433 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 NAB2Q15742 525 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SIAH1Q8IUQ4 282 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ATP6V1G3Q96LB4 118 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 KLHL4Q9C0H6 718 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ARHGEF10LQ9HCE6 1279 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 SNX12Q9UMY4 172 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PCDHA12Q9UN75 941 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 F8VZ95 297 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 TPPPO94811 219 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 CDH2P19022 906 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 GP5P40197 560 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 NAPAP54920 295 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 C21orf59P57076 290 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 BBS9Q3SYG4 887 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 MDH1BQ5I0G3 518 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SEL1L2Q5TEA6 688 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PDIK1LQ8N165 341 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SERPINB12Q96P63 405 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 KCNK16Q96T55 309 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PHF20Q9BVI0 1012 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 GOLGA8SH3BPF8 625 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 TK2O00142 265 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 TRIM71Q2Q1W2 868 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 BICRALQ6AI39 1079 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SYCE2Q6PIF2 218 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 AGXT2Q9BYV1 514 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 IARS2Q9NSE4 1012 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 PGM1P36871 562 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PGGT1BP53609 377 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PPATQ06203 517 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 KCNB1Q14721 858 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.24□□□□□ -1.89
NEB-220ENST00000618972 CPA5Q8WXQ8 436 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SHKBP1Q8TBC3 707 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 HERC5Q9UII4 1024 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 RGS5O15539 181 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 FAPQ12884 760 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PTK2BQ14289 1009 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 DNAL1Q4LDG9 190 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 FANCEQ9HB96 536 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 TBK1Q9UHD2 729 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 LRRC53A6NM62 1247 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 H0YCG3 227 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SERPING1P05155 500 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ORC2Q13416 577 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 KIAA1755Q5JYT7 1200 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 RARS2Q5T160 578 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 B3GNT6Q6ZMB0 384 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 BAP1Q92560 729 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 C7orf25Q9BPX7 421 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 FOXP1Q9H334 677 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 KIAA1586Q9HCI6 787 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 USP15Q9Y4E8 981 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 PMS2P54278 862 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ALDH18A1P54886 795 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 ELF3P78545 371 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 GPSM2P81274 684 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 TRIM16LQ309B1 348 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 BTN2A1Q7KYR7 527 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PYROXD1Q8WU10 500 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 BLOC1S4Q9NUP1 217 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 CFAP69A5D8W1 941 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 UNCXA6NJT0 531 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 HEXIM1O94992 359 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 AKR1B1P15121 316 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 CTSWP56202 376 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SEZ6Q53EL9 994 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 DNALI1O14645 258 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 PPP1R11O60927 126 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 NR1D1P20393 614 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 TUBP50607 506 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 CASP5P51878 434 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 KPNA2P52292 529 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 RPL19P84098 196 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 RUNX1T1Q06455 604 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ZNF658Q5TYW1 1059 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 LMBRD2Q68DH5 695 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 MICALL2Q8IY33 904 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ZNF34Q8IZ26 560 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 RBM46Q8TBY0 533 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 SH3TC2Q8TF17 1288 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PPP1R36Q96LQ0 422 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 RPAP3Q9H6T3 665 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 TRIM39Q9HCM9 518 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 DCP1AQ9NPI6 582 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 TRIM49P0CI25 452 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 TRIM49CP0CI26 452 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ZYXQ15942 572 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 KCNH5Q8NCM2 988 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 PTPN22Q9Y2R2 807 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 SYNCRIPO60506 623 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 PDHA1P08559 390 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 GALCP54803 685 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 YWHAEP62258 255 aaKnown RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 BDH2Q9BUT1 245 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 ETNK1Q9HBU6 452 aa3.24□□□□□ -1.89
NEB-220ENST00000618972 CAB39Q9Y376 341 aaPredicted RBP3.24□□□□□ -1.89
NEB-220ENST00000618972 TCOF1Q13428 1488 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms