RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PPP1R3GB7ZBB8 358 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 BIN1O00499 593 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 IKBKBO14920 756 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 HNRNPDLO14979 420 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 KIAA0391O15091 583 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CLIC2O15247 247 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 OGTO15294 1046 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 EIF3DO15371 548 aaKnown RBP eCLIP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CBFA2T2O43439 604 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 TRAPPC3O43617 180 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 FGF18O76093 207 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PAPLNO95428 1278 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 POMCP01189 267 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MYL1P05976 194 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 TPM1P09493 284 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CXCL8P10145 99 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MCF2P10911 925 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 ITGA4P13612 1032 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 DNAJB1P25685 340 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MLH1P40692 756 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 GRM5P41594 1212 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PRCPP42785 496 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SLC11A1P49279 550 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 ACOT2P49753 483 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 LIG4P49917 911 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 ZNF75DP51815 510 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 GUCY2FP51841 1108 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PMS1P54277 932 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SNRPFP62306 86 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 ITIH3Q06033 890 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SPAG1Q07617 926 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 DSC1Q08554 894 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 STRN3Q13033 797 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CAMK1Q14012 370 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MORC3Q14149 939 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SMC1AQ14683 1233 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 TMEM132AQ24JP5 1023 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 ZCWPW2Q504Y3 356 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 GLRA4Q5JXX5 417 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 KANK3Q6NY19 840 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CD300LGQ6UXG3 332 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CREBRFQ8IUR6 639 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CD302Q8IX05 232 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MRPL43Q8N983 215 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 KLHL23Q8NBE8 558 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 COLGALT1Q8NBJ5 622 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CCDC112Q8NEF3 446 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PLEKHO2Q8TD55 490 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 POF1BQ8WVV4 589 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 RABGGTAQ92696 567 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 C18orf25Q96B23 403 aaPredicted RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SAAL1Q96ER3 474 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 BICD1Q96G01 975 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 DDX27Q96GQ7 796 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SNX27Q96L92 541 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 NECTIN4Q96NY8 510 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 FAM193BQ96PV7 902 aaPredicted RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PPP1R10Q96QC0 940 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MED15Q96RN5 788 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MSTO1Q9BUK6 570 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 COLEC11Q9BWP8 271 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SRRTQ9BXP5 876 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 EMILIN2Q9BXX0 1053 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 GTPBP4Q9BZE4 634 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PCIF1Q9H4Z3 704 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 UBE2ZQ9H832 354 aaPredicted RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PLEKHA5Q9HAU0 1116 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CBX8Q9HC52 389 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 AGPAT3Q9NRZ7 376 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SLC38A7Q9NVC3 462 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 DZANK1Q9NVP4 752 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 DMAC2Q9NW81 257 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MARCH5Q9NX47 278 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 DNAJB4Q9UDY4 337 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PARP2Q9UGN5 583 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CPSF3Q9UKF6 684 aaKnown RBP5.7□□□□□ -1.5
SHMT1-211ENST00000618902 MAFFQ9ULX9 164 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PCDHB13Q9Y5F0 798 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 PCDHGC5Q9Y5F6 944 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 ANK1P16157 1881 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 SCN1AP35498 2009 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 NLRC5Q86WI3 1866 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 SMIM28A0A1B0GU29 152 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 TTC26A0AVF1 554 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 GOLGA6L9A6NEM1 432 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 LACTBL1A8MY62 500 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 NT5C1B-RDH14C9J2C7 533 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 TMEM189-UBE2V1I3L0A0 370 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 TNFRSF10AO00220 468 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 PPEF2O14830 753 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 FSCN2O14926 492 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 GRM6O15303 877 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CLDN3O15551 220 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 XPOTO43592 962 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 EFEMP2O95967 443 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 ITGB1P05556 798 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 GALTP07902 379 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CLTAP09496 248 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CTSAP10619 480 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 BMP1P13497 986 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms