RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PCMTD2Q9NV79 361 aa11.21□□□□□ -0.62
CLTCL1-209ENST00000617103 RBAKQ9NYW8 714 aaPredicted RBP11.21□□□□□ -0.62
CLTCL1-209ENST00000617103 LOC100653049A0A140TA62 436 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 F5H423 210 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 KCNN4O15554 427 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 SLC26A4O43511 780 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 KRT34O76011 436 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 S100A5P33763 92 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 PSMC5P62195 406 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CDK17Q00537 523 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 ADRM1Q16186 407 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 ZNF568Q3ZCX4 644 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CLEC4GQ6UXB4 293 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 PLD3Q8IV08 490 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 FLAD1Q8NFF5 587 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 PIGBQ92521 554 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 ATXN7L3BQ96GX2 97 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 MAGEB18Q96M61 343 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 COA1Q9GZY4 146 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 C20orf96Q9NUD7 363 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 KLHL11Q9NVR0 708 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 GRID1Q9ULK0 1009 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 MINPP1Q9UNW1 487 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CHMP2BQ9UQN3 213 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 DTNAQ9Y4J8 743 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 TAF6LQ9Y6J9 622 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 M0R3G1 203 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 PLEKP08567 350 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 HSPA1AP0DMV8 641 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 HSPA1BP0DMV9 641 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 PDHBP11177 359 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 RARGP13631 454 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 LAMB3Q13751 1172 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 ARID3BQ8IVW6 561 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 PRPF18Q99633 342 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 RUBCNLQ9H714 662 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CDY2AQ9Y6F7 541 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CDY1Q9Y6F8 540 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 NPHP3-ACAD11A0A0J9YXS1 232 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 SERPINB1P30740 379 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 COPAP53621 1224 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 GRIN1Q05586 938 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 PTPAQ15257 358 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 SMAD1Q15797 465 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 ZC3H12BQ5HYM0 836 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 EFHC2Q5JST6 749 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 SLC13A5Q86YT5 568 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 DDHD1Q8NEL9 900 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CYGBQ8WWM9 190 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 ISCA1Q9BUE6 129 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 LACRTQ9GZZ8 138 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 WDR35Q9P2L0 1181 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 HEY2Q9UBP5 337 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 NAGPAQ9UK23 515 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 DUSP10Q9Y6W6 482 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 RSPH10B2B2RC85 870 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 UBOX5O94941 541 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 RSPH10BP0C881 870 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CDH2P19022 906 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 COPB2P35606 906 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 NLRP11P59045 1033 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CLEC4FQ8N1N0 589 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 OR6P1Q8NGX9 317 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 C18orf8Q96DM3 657 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 CAAP1Q9H8G2 361 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 AGO2Q9UKV8 859 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 HPSEQ9Y251 543 aa11.2□□□□□ -0.62
CLTCL1-209ENST00000617103 A0A087X0T9 212 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 FAM228BP0C875 321 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 GEMIN4P57678 1058 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 DEFA1P59665 94 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 DEFA3P59666 94 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 SLC20A2Q08357 652 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 PIGHQ14442 188 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 DUOXA2Q1HG44 320 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 PRPF38AQ8NAV1 312 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 RNF217Q8TC41 542 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 EPS8L3Q8TE67 593 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 KCNB2Q92953 911 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 PPP1R36Q96LQ0 422 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 MKNK1Q9BUB5 465 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 TEX12Q9BXU0 123 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 TRPM1Q7Z4N2 1603 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 ATP9BO43861 1147 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 CAND2O75155 1236 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 KCNA2P16389 499 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 HADHAP40939 763 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 RAP1GDS1P52306 607 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 KCNA1Q09470 495 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 ACBD5Q5T8D3 534 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 DSTYKQ6XUX3 929 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 EEPD1Q7L9B9 569 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 NDUFAF2Q8N183 169 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 CPA5Q8WXQ8 436 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 TOPORSQ9NS56 1045 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 LRRC7Q96NW7 1537 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 ABCB11O95342 1321 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms