RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 FOXO6A8MYZ6 492 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 PSTPIP1O43586 416 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 ZBED4O75132 1171 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 CYP11B1P15538 503 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 RRM1P23921 792 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 MARK3P27448 753 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 GCAP28676 217 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 MAPK4P31152 587 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 VHLP40337 213 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 GCLCP48506 637 aaPredicted RBP16.54■□□□□ 0.24
GPN1-212ENST00000616939 GCLMP48507 274 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 OCRLQ01968 901 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 B3GNT9Q6UX72 402 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 ZNF365Q70YC5 407 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 DAW1Q8N136 415 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 LRRC8CQ8TDW0 803 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 DDX1Q92499 740 aaKnown RBP16.54■□□□□ 0.24
GPN1-212ENST00000616939 RPGRQ92834 1020 aaKnown RBP16.54■□□□□ 0.24
GPN1-212ENST00000616939 KAT5Q92993 513 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 FAM136AQ96C01 138 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 ZNF333Q96JL9 665 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 TMEM117Q9H0C3 514 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 VCXQ9H320 206 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 TRABDQ9H4I3 376 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 NFASCO94856 1347 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 ZNF335Q9H4Z2 1342 aaPredicted RBP16.54■□□□□ 0.24
GPN1-212ENST00000616939 ENO4A6NNW6 628 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 F5H6K3 240 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 K7ENM7 598 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 GNPATO15228 680 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 CYP26A1O43174 497 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 ZWINTO95229 277 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 KLRC2P26717 231 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 PTDSS1P48651 473 aaKnown RBP16.54■□□□□ 0.24
GPN1-212ENST00000616939 MXRA7P84157 204 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 TNIP1Q15025 636 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 ZC3H12AQ5D1E8 599 aaKnown RBP16.54■□□□□ 0.24
GPN1-212ENST00000616939 SLC47A2Q86VL8 602 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 CCDC125Q86Z20 511 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 TRAPPC9Q96Q05 1148 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 KCNQ5Q9NR82 932 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 ETAA1Q9NY74 926 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 FETUBQ9UGM5 382 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 TBK1Q9UHD2 729 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 SLC24A2Q9UI40 661 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 ZMYND8Q9ULU4 1186 aaPredicted RBP16.54■□□□□ 0.24
GPN1-212ENST00000616939 LRCH1Q9Y2L9 728 aa16.54■□□□□ 0.24
GPN1-212ENST00000616939 EXOC1LA0A1B0GW35 172 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 ARHGEF35A5YM69 484 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 GSTA2P09210 222 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 EPHB2P29323 1055 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 GPC3P51654 580 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 ENPEPQ07075 957 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 ZRSR2Q15696 482 aaKnown RBP16.53■□□□□ 0.24
GPN1-212ENST00000616939 HHIPL2Q6UWX4 724 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 GALNT15Q8N3T1 639 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 CYP2W1Q8TAV3 490 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 PLEKHO2Q8TD55 490 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 PARD3BQ8TEW8 1205 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 ATG4AQ8WYN0 398 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 RBM17Q96I25 401 aaKnown RBP16.53■□□□□ 0.24
GPN1-212ENST00000616939 HERPUD2Q9BSE4 406 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 DENND2DQ9H6A0 471 aaPredicted RBP16.53■□□□□ 0.24
GPN1-212ENST00000616939 KIAA1586Q9HCI6 787 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 HSPBP1Q9NZL4 362 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 CHORDC1Q9UHD1 332 aaPredicted RBP16.53■□□□□ 0.24
GPN1-212ENST00000616939 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
GPN1-212ENST00000616939 SIGLEC16A6NMB1 481 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 NVLO15381 856 aaKnown RBP16.52■□□□□ 0.24
GPN1-212ENST00000616939 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 BBOX1O75936 387 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 SP100P23497 879 aaPredicted RBP16.52■□□□□ 0.24
GPN1-212ENST00000616939 PAPOLAP51003 745 aaKnown RBP16.52■□□□□ 0.24
GPN1-212ENST00000616939 RAB27AP51159 221 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 FYB2Q5VWT5 728 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 TRIM68Q6AZZ1 485 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 NSMFQ6X4W1 530 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 SEPT14Q6ZU15 432 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 EGFL6Q8IUX8 553 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 HELQQ8TDG4 1101 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 TEKT4Q8WW24 435 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.24
GPN1-212ENST00000616939 IFT43Q96FT9 208 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 SMC6Q96SB8 1091 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 RBM15Q96T37 977 aaKnown RBP eCLIP16.52■□□□□ 0.24
GPN1-212ENST00000616939 PHACTR1Q9C0D0 580 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 EHMT1Q9H9B1 1298 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 DNAJC17Q9NVM6 304 aaKnown RBP16.52■□□□□ 0.24
GPN1-212ENST00000616939 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.52■□□□□ 0.24
GPN1-212ENST00000616939 CPSF2Q9P2I0 782 aaKnown RBP16.52■□□□□ 0.24
GPN1-212ENST00000616939 LARSQ9P2J5 1176 aaKnown RBP16.52■□□□□ 0.24
GPN1-212ENST00000616939 ZFP69BQ9UJL9 534 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.24
GPN1-212ENST00000616939 R3HDM2Q9Y2K5 976 aaKnown RBP16.52■□□□□ 0.24
GPN1-212ENST00000616939 DNALI1O14645 258 aaPredicted RBP16.52■□□□□ 0.23
GPN1-212ENST00000616939 TYROBPO43914 113 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 GAS7O60861 476 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms