RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 OCEL1Q9H607 264 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 TOPORSQ9NS56 1045 aaPredicted RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 GRID1Q9ULK0 1009 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 PCDHA3Q9Y5H8 950 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 SNED1Q8TER0 1413 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 KITP10721 976 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 MAGEA4P43358 317 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 DYNLT1P63172 113 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 CFAP157Q5JU67 520 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 UBE2OQ9C0C9 1292 aaKnown RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 SUDS3Q9H7L9 328 aaPredicted RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 DDX4Q9NQI0 724 aaKnown RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 PRKAG3Q9UGI9 489 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 WASF2Q9Y6W5 498 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 UBR2Q8IWV8 1755 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 HSPA6P17066 643 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 ADRA1DP25100 572 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 CACNA2D1P54289 1103 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 MRPS35P82673 323 aaKnown RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 THOC5Q13769 683 aaKnown RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 MFSD5Q6N075 450 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 AGGF1Q8N302 714 aaeCLIP13.97□□□□□ -0.17
MSH6-214ENST00000616033 RFWD2Q8NHY2 731 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 JDP2Q8WYK2 163 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 GJD4Q96KN9 370 aaPredicted RBP13.97□□□□□ -0.17
MSH6-214ENST00000616033 WNT8AQ9H1J5 351 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 CD209Q9NNX6 404 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 LRRC4BQ9NT99 713 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 HEY2Q9UBP5 337 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 SERPINB13Q9UIV8 391 aa13.97□□□□□ -0.17
MSH6-214ENST00000616033 ANKRD33BA6NCL7 494 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 PFDN1O60925 122 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 T-ENOLP0DO92 83 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 KRT4P19013 534 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 GNAZP19086 355 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 MARK3P27448 753 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■■■□□ 17.5
MSH6-214ENST00000616033 SLFN13Q68D06 897 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 PPFIBP2Q8ND30 876 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 OLIG1Q8TAK6 271 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 SLC7A6OSQ96CW6 309 aaPredicted RBP13.96□□□□□ -0.17
MSH6-214ENST00000616033 FAM161BQ96MY7 647 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 G3V3G9 751 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 FUT4P22083 530 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 CUL3Q13618 768 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 PCNX4Q63HM2 1172 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 CCDC174Q6PII3 467 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 DRAXINQ8NBI3 349 aaPredicted RBP13.96□□□□□ -0.17
MSH6-214ENST00000616033 TTC17Q96AE7 1141 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 YIPF2Q9BWQ6 316 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.96□□□□□ -0.17
MSH6-214ENST00000616033 MARCOQ9UEW3 520 aaPredicted RBP13.96□□□□□ -0.17
MSH6-214ENST00000616033 NENFQ9UMX5 172 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 USP20Q9Y2K6 914 aa13.96□□□□□ -0.17
MSH6-214ENST00000616033 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.96□□□□□ -0.18
MSH6-214ENST00000616033 RPS6KA4O75676 772 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 CAPN15O75808 1086 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 OATP04181 439 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 ITIH2P19823 946 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 ORC2Q13416 577 aaPredicted RBP13.96□□□□□ -0.18
MSH6-214ENST00000616033 RNF43Q68DV7 783 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 CYFIP1Q7L576 1253 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 OTOAQ7RTW8 1153 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 TTC7BQ86TV6 843 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 LRRC6Q86X45 466 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 CFAP61Q8NHU2 1237 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 MMADHCQ9H3L0 296 aaPredicted RBP13.96□□□□□ -0.18
MSH6-214ENST00000616033 ARL8BQ9NVJ2 186 aa13.96□□□□□ -0.18
MSH6-214ENST00000616033 RNF8O76064 485 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 MXI1P50539 228 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 VAMP7P51809 220 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 SMAD1Q15797 465 aaKnown RBP13.95□□□□□ -0.18
MSH6-214ENST00000616033 FYB2Q5VWT5 728 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 ASAP3Q8TDY4 903 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 CLPTM1LQ96KA5 538 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 PLVAPQ9BX97 442 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 FHDC1Q9C0D6 1143 aaPredicted RBP13.95□□□□□ -0.18
MSH6-214ENST00000616033 STOML1Q9UBI4 398 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 NARFQ9UHQ1 456 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 NUMBLQ9Y6R0 609 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 ITGB4P16144 1822 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 ABCA3Q99758 1704 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 NHSL1Q5SYE7 1610 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 UTRNP46939 3433 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 ARHGEF35A5YM69 484 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 SLC16A3O15427 465 aaKnown RBP13.95□□□□□ -0.18
MSH6-214ENST00000616033 AHCYL1O43865 530 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 DCTN3O75935 186 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 GYS1P13807 737 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 CCNB1P14635 433 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 KDSRQ06136 332 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 WDR60Q8WVS4 1066 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 MAML1Q92585 1016 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 KIFC3Q9BVG8 833 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 TRAIPQ9BWF2 469 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 KIAA1586Q9HCI6 787 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.95□□□□□ -0.18
MSH6-214ENST00000616033 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms