RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CCDC166P0CW27 439 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 FCGR1AP12314 374 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 TTKP33981 857 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 PTK7Q13308 1070 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 TAB1Q15750 504 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 C3orf62Q6ZUJ4 267 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 C4orf33Q8N1A6 199 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 CCNYL1Q8N7R7 359 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 GDPD5Q8WTR4 605 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 SDR42E1Q8WUS8 393 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 ADAM22Q9P0K1 906 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 TRIP4Q15650 581 aaPredicted RBP14.44□□□□□ -0.1
CHD1-212ENST00000614616 NSMFQ6X4W1 530 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 ZCCHC7Q8N3Z6 543 aaKnown RBP14.44□□□□□ -0.1
CHD1-212ENST00000614616 APOL6Q9BWW8 343 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 XPO7Q9UIA9 1087 aaKnown RBP14.44□□□□□ -0.1
CHD1-212ENST00000614616 CCDC81Q6ZN84 652 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 JDP2Q8WYK2 163 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 RMND5BQ96G75 393 aaPredicted RBP14.44□□□□□ -0.1
CHD1-212ENST00000614616 RSL24D1Q9UHA3 163 aaKnown RBP14.44□□□□□ -0.1
CHD1-212ENST00000614616 DGUOKQ16854 277 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 MARK2Q7KZI7 788 aaKnown RBP14.44□□□□□ -0.1
CHD1-212ENST00000614616 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHD1-212ENST00000614616 TOMM70O94826 608 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 TCN1P20061 433 aaPredicted RBP14.44□□□□□ -0.1
CHD1-212ENST00000614616 PTDSS1P48651 473 aaKnown RBP14.44□□□□□ -0.1
CHD1-212ENST00000614616 KCTD21Q4G0X4 260 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 C12orf60Q5U649 245 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 TAGAPQ8N103 731 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 AGR3Q8TD06 166 aa14.44□□□□□ -0.1
CHD1-212ENST00000614616 RAD51BO15315 384 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 FXR1P51114 621 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHD1-212ENST00000614616 DDIASQ8IXT1 998 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 NUP93Q8N1F7 819 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 UTYO14607 1347 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 PRR23AA6NEV1 266 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 MAP2K7O14733 419 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 TRIM13O60858 407 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 XRCC4Q13426 336 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 BFSP2Q13515 415 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 MTDHQ86UE4 582 aaKnown RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 FBXO28Q9NVF7 368 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 IQGAP3Q86VI3 1631 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 WDR7Q9Y4E6 1490 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 MYL2P10916 166 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 ITGADQ13349 1161 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 KRT72Q14CN4 511 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 JAMLQ86YT9 394 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 SNX19Q92543 992 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 GPR108Q9NPR9 543 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 PARVAQ9NVD7 372 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 C6orf203Q9P0P8 240 aaPredicted RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 CTSWP56202 376 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 THOC7Q6I9Y2 204 aaKnown RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 SYN2Q92777 582 aaPredicted RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 METTL5Q9NRN9 209 aaKnown RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 USP17L12C9JPN9 530 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 USP17L21D6R901 530 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 RNF103O00237 685 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 DDHD2O94830 711 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 NR3C1P04150 777 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 FAM43BQ6ZT52 329 aaPredicted RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 ERICH1Q86X53 443 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 CNBD1Q8NA66 436 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 SKA1Q96BD8 255 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 CPSF1Q10570 1443 aaKnown RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 KIAA1210Q9ULL0 1709 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 BTN3A3O00478 584 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 STK4Q13043 487 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 KLHL17Q6TDP4 642 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 LRRC6Q86X45 466 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 BBS5Q8N3I7 341 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 AGAP11Q8TF27 550 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 POTEFA5A3E0 1075 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 PEX5P50542 639 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 USP11P51784 963 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 DRAP1Q14919 205 aaPredicted RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 CHI3L2Q15782 390 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 RBBP7Q16576 425 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 MIGA2Q7L4E1 593 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 MLPHQ9BV36 600 aaPredicted RBP14.43□□□□□ -0.1
CHD1-212ENST00000614616 ADAM30Q9UKF2 790 aa14.43□□□□□ -0.1
CHD1-212ENST00000614616 FOSP01100 380 aaPredicted RBP14.42□□□□□ -0.1
CHD1-212ENST00000614616 CDC25CP30307 473 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 TRIM71Q2Q1W2 868 aaKnown RBP14.42□□□□□ -0.1
CHD1-212ENST00000614616 SPANXN2Q5MJ10 180 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 CLEC4GQ6UXB4 293 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 ANKMY2Q8IV38 441 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 ADSSL1Q8N142 457 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 LCORLQ8N3X6 602 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 S100ZQ8WXG8 99 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 EXT2Q93063 718 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 E2F7Q96AV8 911 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 CCDC28BQ9BUN5 200 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 CYLDQ9NQC7 956 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 ARHGEF40Q8TER5 1519 aa14.42□□□□□ -0.1
CHD1-212ENST00000614616 KANSL1LA0AUZ9 987 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms