RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 HLA-DRAP01903 254 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 SRGAP2CP0DJJ0 459 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 PSMA2P25787 234 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 PPATQ06203 517 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 BMT2Q1RMZ1 405 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 ERICH1Q86X53 443 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 CNOT7Q9UIV1 285 aaKnown RBP13.3□□□□□ -0.28
MSH6-213ENST00000614496 PCDHA3Q9Y5H8 950 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 SCINQ9Y6U3 715 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 H0YGN5 161 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 SNX3O60493 162 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 DCTN3O75935 186 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 RNF8O76064 485 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 GHRP10912 638 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 SMAD1Q15797 465 aaKnown RBP13.3□□□□□ -0.28
MSH6-213ENST00000614496 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
MSH6-213ENST00000614496 PICK1Q9NRD5 415 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 RBAKQ9NYW8 714 aaPredicted RBP13.3□□□□□ -0.28
MSH6-213ENST00000614496 HERC5Q9UII4 1024 aaKnown RBP13.3□□□□□ -0.28
MSH6-213ENST00000614496 STXBP5LQ9Y2K9 1186 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 NFS1Q9Y697 457 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 IGKV6D-41A0A0C4DH26 115 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 GH1P01241 217 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 NUDT17P0C025 328 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 GNPTABQ3T906 1256 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 PREPLQ4J6C6 727 aaPredicted RBP13.3□□□□□ -0.28
MSH6-213ENST00000614496 RHPN2Q8IUC4 686 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 THNSL1Q8IYQ7 743 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 CFAP36Q96G28 342 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 UBN1Q9NPG3 1134 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 GGA2Q9UJY4 613 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 AGO2Q9UKV8 859 aaKnown RBP13.3□□□□□ -0.28
MSH6-213ENST00000614496 ARHGAP42A6NI28 874 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 P4HA2O15460 535 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 ADRB2P07550 413 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 CIITAP33076 1130 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 MMP13P45452 471 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 NPTX2P47972 431 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 JAK3P52333 1124 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 SMTNL2Q2TAL5 461 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 LONP2Q86WA8 852 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 PDIK1LQ8N165 341 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 KCTD6Q8NC69 237 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 CCT6BQ92526 530 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 RBM41Q96IZ5 413 aaKnown RBP13.29□□□□□ -0.28
MSH6-213ENST00000614496 PCDHB2Q9Y5E7 798 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 EDIL3O43854 480 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 ESRRAP11474 423 aaPredicted RBP13.29□□□□□ -0.28
MSH6-213ENST00000614496 RRP1BQ14684 758 aaKnown RBP13.29□□□□□ -0.28
MSH6-213ENST00000614496 CDO1Q16878 200 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 TKFCQ3LXA3 575 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 ACCSLQ4AC99 568 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 DARS2Q6PI48 645 aaKnown RBP13.29□□□□□ -0.28
MSH6-213ENST00000614496 NIM1KQ8IY84 436 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 CCDC110Q8TBZ0 833 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 AGAP11Q8TF27 550 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 MCEEQ96PE7 176 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 TMEM237Q96Q45 408 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 LRRC4CQ9HCJ2 640 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 PCDHA10Q9Y5I2 948 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 ZSCAN5DPP0CG00 497 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 HSPA1LP34931 641 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 KRT76Q01546 638 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 PPP2R5CQ13362 524 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 GMCL1P1Q8NEA9 526 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 DTX3LQ8TDB6 740 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 MKL1Q969V6 931 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
MSH6-213ENST00000614496 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 WHRNQ9P202 907 aa13.29□□□□□ -0.28
MSH6-213ENST00000614496 GYG2O15488 501 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 SMIM24O75264 130 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 DNAJC8O75937 253 aaPredicted RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 PSAPP07602 524 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 MARK3P27448 753 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 POLD1P28340 1107 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 ECHS1P30084 290 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 RPS6P62753 249 aaKnown RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 KRT81Q14533 505 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 C1orf131Q8NDD1 294 aaKnown RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 P2RX7Q99572 595 aaKnown RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 RNF146Q9NTX7 359 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 TXNDC16Q9P2K2 825 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 ENO4A6NNW6 628 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 LUC7L3O95232 432 aaKnown RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 KITP10721 976 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 SLC1A1P43005 524 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 SPRED3Q2MJR0 410 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 CAPRIN2Q6IMN6 1127 aaKnown RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 LVRNQ6Q4G3 990 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 LENG9Q96B70 501 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 PCYOX1Q9UHG3 505 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 PHTF1Q9UMS5 762 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 SRRM3A6NNA2 597 aaPredicted RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 ENTPD3O75355 529 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 GSTA1P08263 222 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms