RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 TBK1Q9UHD2 729 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ATXN2Q99700 1313 aaKnown RBP11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ZSWIM8A7E2V4 1837 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ANP32DO95626 131 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 RFC5P40937 340 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 FMO1Q01740 532 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 FAM102BQ5T8I3 360 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 THEMIS2Q5TEJ8 643 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SNRNP48Q6IEG0 339 aaKnown RBP11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SEMA4DQ92854 862 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 WNK4Q96J92 1243 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 PAGR1Q9BTK6 254 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 FBXO40Q9UH90 709 aa11.6□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 HMGB1P1B2RPK0 211 aaPredicted RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 FTLP02792 175 aaPredicted RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 CHN1P15882 459 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 GCLMP48507 274 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 PPP2R2AP63151 447 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ZNF844Q08AG5 666 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 TARBP2Q15633 366 aaKnown RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 DUPD1Q68J44 220 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SLFN12LQ6IEE8 588 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 NOP9Q86U38 636 aaKnown RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 RPUSD2Q8IZ73 545 aaKnown RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 PSPC1Q8WXF1 523 aaKnown RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 PCDHB18PQ96TA0 734 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 RAB17Q9H0T7 212 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 AZI2Q9H6S1 392 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 A1CFQ9NQ94 594 aaKnown RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 TAS2R14Q9NYV8 317 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 GABBR1Q9UBS5 961 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 PCDHA3Q9Y5H8 950 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ALG6Q9Y672 507 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SBF1O95248 1867 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 GOLGA6L10A0A0M3HER8 536 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 LDHAP00338 332 aaKnown RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 MYCLP12524 364 aaPredicted RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 NAMPTP43490 491 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ACTR2P61160 394 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 IFI35P80217 286 aaPredicted RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 UBAP2Q5T6F2 1119 aaKnown RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ACAD10Q6JQN1 1059 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 CAPN12Q6ZSI9 719 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 FAM43BQ6ZT52 329 aaPredicted RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SEPT14Q6ZU15 432 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 LRRC34Q8IZ02 419 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 UBL4BQ8N7F7 174 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 CCDC197Q8NCU1 140 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 TRIM11Q96F44 468 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ZSWIM1Q9BR11 485 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 PORCNQ9H237 461 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ABCF3Q9NUQ8 709 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SAMD15Q9P1V8 674 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 ADGRA2Q96PE1 1338 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 TGFB3P10600 412 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 UNGP13051 313 aaPredicted RBP11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 CYP11B1P15538 503 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 CHRNA3P32297 505 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 AP3M2P53677 418 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 BPIFB4P59827 614 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SATB1Q01826 763 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 AADACL2Q6P093 401 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 SAMD7Q7Z3H4 446 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 CBWD2Q8IUF1 395 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 FAXDC2Q96IV6 333 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 VCPIP1Q96JH7 1222 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 CEP170P1Q96L14 293 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 NT5C1BQ96P26 610 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 PCIF1Q9H4Z3 704 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
SENP3-EIF4A1-201ENST00000614237 MYH9P35579 1960 aaKnown RBP11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 TISP43B9A030 160 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 RASSF9O75901 435 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 C4BPAP04003 597 aaKnown RBP11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 FGFR4P22455 802 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 AGBL2Q5U5Z8 902 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 PALB2Q86YC2 1186 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 EXOC8Q8IYI6 725 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 GPC2Q8N158 579 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 RNF217Q8TC41 542 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 TMBIM4Q9HC24 238 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 GPRC5CQ9NQ84 441 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 TMOD4Q9NZQ9 345 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 ADGRA3Q8IWK6 1321 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 TESPA1A2RU30 521 aaPredicted RBP11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 PTGIRP43119 386 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 BIRC3Q13489 604 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 CLEC16AQ2KHT3 1053 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 ZACNQ401N2 412 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 ANKS4BQ8N8V4 417 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 C3orf20Q8ND61 904 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 IFT74Q96LB3 600 aa11.58□□□□□ -0.56
SENP3-EIF4A1-201ENST00000614237 WRNIP1Q96S55 665 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms