RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 RNF19AQ9NV58 838 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 TRMT1Q9NXH9 659 aaKnown RBP14.84□□□□□ -0.03
TMEM254-213ENST00000613758 SMIM28A0A1B0GU29 152 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 TRIM43BA6NCK2 446 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 MEIS3P2A8K0S8 358 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 C9IYK1 514 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 KCNE1P15382 129 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 IBSPP21815 317 aaPredicted RBP14.84□□□□□ -0.03
TMEM254-213ENST00000613758 TRPC3Q13507 836 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 ZBTB6Q15916 424 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 WDR44Q5JSH3 913 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 SCARA3Q6AZY7 606 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 PHLDB3Q6NSJ2 640 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 AGMOQ6ZNB7 445 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 DEFB128Q7Z7B8 93 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 C1orf127Q8N9H9 656 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 RNF169Q8NCN4 708 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 LINC01599Q8WXQ3 324 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 BAP1Q92560 729 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 TRIM43Q96BQ3 446 aaPredicted RBP14.84□□□□□ -0.03
TMEM254-213ENST00000613758 TSPAN18Q96SJ8 248 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 PI4K2AQ9BTU6 479 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 NAA15Q9BXJ9 866 aaKnown RBP14.84□□□□□ -0.03
TMEM254-213ENST00000613758 TSPYL2Q9H2G4 693 aaPredicted RBP14.84□□□□□ -0.03
TMEM254-213ENST00000613758 APEX2Q9UBZ4 518 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 FBXL5Q9UKA1 691 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 GIT1Q9Y2X7 761 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 FHOD1Q9Y613 1164 aa14.84□□□□□ -0.03
TMEM254-213ENST00000613758 ANK1P16157 1881 aa14.83□□□□□ -0.03
TMEM254-213ENST00000613758 SOWAHDA6NJG2 315 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 KIAA0355O15063 1070 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 TIMP1P01033 207 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 ATF7P17544 494 aaPredicted RBP14.83□□□□□ -0.04
TMEM254-213ENST00000613758 FAM189BP81408 668 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 MTF1Q14872 753 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 GLRA4Q5JXX5 417 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 IQCEQ6IPM2 695 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 RAD9BQ6WBX8 426 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 RRAGAQ7L523 313 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 ARHGEF19Q8IW93 802 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 OR8K1Q8NGG5 319 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 NT5C1BQ96P26 610 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 DNAJC7Q99615 494 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 UBE2TQ9NPD8 197 aaPredicted RBP14.83□□□□□ -0.04
TMEM254-213ENST00000613758 C1orf112Q9NSG2 853 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 DPP3Q9NY33 737 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 DNAJC12Q9UKB3 198 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 ENPP3O14638 875 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 ZC3H11AO75152 810 aaKnown RBP eCLIP14.83□□□□□ -0.04
TMEM254-213ENST00000613758 GUCY2FP51841 1108 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 TCTN1Q2MV58 587 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.83□□□□□ -0.04
TMEM254-213ENST00000613758 NYAP1Q6ZVC0 841 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 ZNF598Q86UK7 904 aaKnown RBP14.83□□□□□ -0.04
TMEM254-213ENST00000613758 TATDN2Q93075 761 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 ELMO3Q96BJ8 720 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 PPP1R13BQ96KQ4 1090 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 GAD1Q99259 594 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 UBN1Q9NPG3 1134 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 AJAP1Q9UKB5 411 aaPredicted RBP14.83□□□□□ -0.04
TMEM254-213ENST00000613758 DAAM1Q9Y4D1 1078 aa14.83□□□□□ -0.04
TMEM254-213ENST00000613758 CITO14578 2027 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 EOMESO95936 686 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 KRT19P08727 400 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 RAG1P15918 1043 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 RFC2P35250 354 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 MLH1P40692 756 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 MYL6P60660 151 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 TSR1Q2NL82 804 aaKnown RBP14.82□□□□□ -0.04
TMEM254-213ENST00000613758 PDXDC1Q6P996 788 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 WDR59Q6PJI9 974 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 TOGARAM2Q6ZUX3 1019 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 REXO1L1PQ8IX06 675 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 TMEM130Q8N3G9 435 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 BEST2Q8NFU1 509 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 C18orf25Q96B23 403 aaPredicted RBP14.82□□□□□ -0.04
TMEM254-213ENST00000613758 ZFP42Q96MM3 310 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 RSAD1Q9HA92 442 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 SIX4Q9UIU6 781 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 ITGA11Q9UKX5 1188 aa14.82□□□□□ -0.04
TMEM254-213ENST00000613758 UBQLN1Q9UMX0 589 aaKnown RBP14.82□□□□□ -0.04
TMEM254-213ENST00000613758 PTGESO14684 152 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 ITGB3P05106 788 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 RFX1P22670 979 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 ITGB8P26012 769 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 RAPGEF1Q13905 1077 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 SGSM1Q2NKQ1 1148 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 CXorf38Q8TB03 319 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 C16orf45Q96MC5 204 aaPredicted RBP14.81□□□□□ -0.04
TMEM254-213ENST00000613758 SPAG5Q96R06 1193 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 STK33Q9BYT3 514 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 IMPG2Q9BZV3 1241 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 ARL5CA6NH57 179 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 LRRC53A6NM62 1247 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 XPOTO43592 962 aaKnown RBP14.81□□□□□ -0.04
TMEM254-213ENST00000613758 CLSTN1O94985 981 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 ASS1P00966 412 aaKnown RBP14.81□□□□□ -0.04
TMEM254-213ENST00000613758 RBP5P82980 135 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 SPOPLQ6IQ16 392 aa14.81□□□□□ -0.04
TMEM254-213ENST00000613758 PPM1KQ8N3J5 372 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms