RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 ARHGEF7Q14155 803 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 DHX40Q8IX18 779 aaKnown RBP21.26■□□□□ 0.99
CTDP1-208ENST00000613122 DLC1Q96QB1 1528 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 SYF2O95926 243 aaKnown RBP21.26■□□□□ 0.99
CTDP1-208ENST00000613122 LRG1P02750 347 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 AKT1P31749 480 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 ARL4DP49703 201 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 NLRP11P59045 1033 aaKnown RBP21.26■□□□□ 0.99
CTDP1-208ENST00000613122 METTL16Q86W50 562 aaKnown RBP21.26■□□□□ 0.99
CTDP1-208ENST00000613122 PABPC5Q96DU9 382 aaKnown RBP21.26■□□□□ 0.99
CTDP1-208ENST00000613122 KLHL11Q9NVR0 708 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 MFN1Q8IWA4 741 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 UVRAGQ9P2Y5 699 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 EIF3DO15371 548 aaKnown RBP eCLIP21.26■□□□□ 0.99
CTDP1-208ENST00000613122 KCTD17Q8N5Z5 321 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 BTBD6Q96KE9 485 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 FOPNLQ96NB1 174 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 SLC13A1Q9BZW2 595 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 TMEM60Q9H2L4 133 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 FAF1Q9UNN5 650 aaPredicted RBP21.26■□□□□ 0.99
CTDP1-208ENST00000613122 DIP2AQ14689 1571 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 DCDC2CA8MYV0 355 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 PNPLA4P41247 253 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 GCLCP48506 637 aaPredicted RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 MMS22LQ6ZRQ5 1243 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 USP33Q8TEY7 942 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 COLEC11Q9BWP8 271 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 TSPYL2Q9H2G4 693 aaPredicted RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.25■□□□□ 0.992e-6■■■■□ 21.7
CTDP1-208ENST00000613122 ZFATQ9P243 1243 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 MYMKA6NI61 221 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 HLA-DRAP01903 254 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 DHX34Q14147 1143 aaKnown RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 FAM47EQ6ZV65 393 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 CXorf38Q8TB03 319 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 MYO3AQ8NEV4 1616 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 HIST1H2AGP0C0S8 130 aaPredicted RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 KCNA2P16389 499 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 HIST1H2ADP20671 130 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 ZC2HC1CQ53FD0 456 aaPredicted RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 DDIASQ8IXT1 998 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 HIST1H2AHQ96KK5 128 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 HIST1H2AJQ99878 128 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 H2AFJQ9BTM1 129 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 GAS2O43903 313 aaKnown RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 GYS1P13807 737 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 HARS2P49590 506 aaKnown RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 SESN2P58004 480 aaPredicted RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 PPP4CP60510 307 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 INTS5Q6P9B9 1019 aaKnown RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 MCEEQ96PE7 176 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 SLITRK1Q96PX8 696 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 MRPL40Q9NQ50 206 aaKnown RBP21.25■□□□□ 0.99
CTDP1-208ENST00000613122 CLCA2Q9UQC9 943 aa21.25■□□□□ 0.99
CTDP1-208ENST00000613122 CNTNAP5Q8WYK1 1306 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 SYNDIG1LA6NDD5 238 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 RHOBTB3O94955 611 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 ACTR5Q9H9F9 607 aaPredicted RBP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 ADGRG1Q9Y653 693 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 GNL1P36915 607 aaPredicted RBP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 LAMB3Q13751 1172 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 PIGHQ14442 188 aaPredicted RBP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 MEI1Q5TIA1 1274 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 NUDCD3Q8IVD9 361 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 GBA2Q9HCG7 927 aaPredicted RBP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 FAM95CA0A1B0GW59 222 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 RPA1P27694 616 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 TAF6P49848 677 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 EFTUD2Q15029 972 aaKnown RBP eCLIP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 ADSSL1Q8N142 457 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 SLC7A14Q8TBB6 771 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 AGAP3Q96P47 875 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 CATSPERBQ9H7T0 1116 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 LIMA1Q9UHB6 759 aaKnown RBP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 PCDHGB4Q9UN71 923 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 PRG3Q9Y2Y8 225 aaPredicted RBP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 GPR182O15218 404 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 MMP14P50281 582 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 DPYDQ12882 1025 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 RNPC3Q96LT9 517 aaKnown RBP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 TMEM8AQ9HCN3 771 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 DIAPH2O60879 1101 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 HIF1AQ16665 826 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 MTHFD1LQ6UB35 978 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 ATL2Q8NHH9 583 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 ATXN7L3BQ96GX2 97 aa21.24■□□□□ 0.99
CTDP1-208ENST00000613122 PRMT6Q96LA8 375 aaPredicted RBP21.24■□□□□ 0.99
CTDP1-208ENST00000613122 EML4Q9HC35 981 aaKnown RBP21.23■□□□□ 0.99
CTDP1-208ENST00000613122 ODC1P11926 461 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 GOLGA7BQ2TAP0 167 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 HIPK4Q8NE63 616 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 MROH8Q9H579 483 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 SLC30A1Q9Y6M5 507 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 LMTK2Q8IWU2 1503 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 VCPP55072 806 aaKnown RBP21.23■□□□□ 0.99
CTDP1-208ENST00000613122 ARHGAP18Q8N392 663 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 TMEM169Q96HH4 297 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 EDRF1Q3B7T1 1238 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 KDM4CQ9H3R0 1056 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms