RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TAS2R40P59535 323 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 IFI35P80217 286 aaPredicted RBP15.05■□□□□ -0
PCDHGA3-202ENST00000612467 QPCTQ16769 361 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 CCDC38Q502W7 563 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 FAM182AQ5T1J6 154 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 GADL1Q6ZQY3 521 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 MMS22LQ6ZRQ5 1243 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 SLC17A8Q8NDX2 589 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 DDX23Q9BUQ8 820 aaKnown RBP15.05■□□□□ -0
PCDHGA3-202ENST00000612467 DHX33Q9H6R0 707 aaKnown RBP15.05■□□□□ -0
PCDHGA3-202ENST00000612467 GPRC5DQ9NZD1 345 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 C19orf81C9J6K1 198 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 FDX1P10109 184 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 CHRNA3P32297 505 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 GCNT1Q02742 428 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 DHX34Q14147 1143 aaKnown RBP15.04■□□□□ -0
PCDHGA3-202ENST00000612467 PSMD6Q15008 389 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 EIF1ADQ8N9N8 165 aaKnown RBP15.04■□□□□ -0
PCDHGA3-202ENST00000612467 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
PCDHGA3-202ENST00000612467 CLMNQ96JQ2 1002 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 CEP89Q96ST8 783 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 PPP1R16BQ96T49 567 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 C17orf75Q9HAS0 396 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 GINM1Q9NU53 330 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 HOXC10Q9NYD6 342 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 SLC12A6Q9UHW9 1150 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 CSDE1O75534 798 aaKnown RBP15.04■□□□□ -0
PCDHGA3-202ENST00000612467 FARP2O94887 1054 aaPredicted RBP15.04■□□□□ -0
PCDHGA3-202ENST00000612467 OAZ1P54368 228 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 WDR44Q5JSH3 913 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 ZNF473Q8WTR7 871 aaKnown RBP15.04■□□□□ -0
PCDHGA3-202ENST00000612467 SLC7A3Q8WY07 619 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 CCT8L2Q96SF2 557 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 AZI2Q9H6S1 392 aa15.04■□□□□ -0
PCDHGA3-202ENST00000612467 PI4K2BG5E9Z4 385 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 TP73O15350 636 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 CHKAP35790 457 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 ARL2P36404 184 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 CORO7P57737 925 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 ADCY2Q08462 1091 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 CUL2Q13617 745 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 TCEAL1Q15170 157 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 PPP1R7Q15435 360 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 SGO2Q562F6 1265 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 SCARA5Q6ZMJ2 495 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 NLRP14Q86W24 1093 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 APOBEC3FQ8IUX4 373 aaKnown RBP15.03■□□□□ -0
PCDHGA3-202ENST00000612467 CCDC50Q8IVM0 306 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 MYCBPAPQ8TBZ2 947 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 PRPF31Q8WWY3 499 aaKnown RBP15.03■□□□□ -0
PCDHGA3-202ENST00000612467 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.03■□□□□ -01e-7■■■■■ 78
PCDHGA3-202ENST00000612467 COPS5Q92905 334 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 TCHPQ9BT92 498 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 EPN3Q9H201 632 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 FAM187AA6NFU0 413 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 DDNO94850 711 aaPredicted RBP15.03■□□□□ -0
PCDHGA3-202ENST00000612467 GGPS1O95749 300 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 GNA15P30679 374 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 TCF7P36402 384 aaPredicted RBP15.03■□□□□ -0
PCDHGA3-202ENST00000612467 PSMC4P43686 418 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 NSFP46459 744 aaKnown RBP15.03■□□□□ -0
PCDHGA3-202ENST00000612467 RPL7AP62424 266 aaKnown RBP15.03■□□□□ -0
PCDHGA3-202ENST00000612467 MTMR3Q13615 1198 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 HSDL1Q3SXM5 330 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 CEP120Q8N960 986 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 VTI1AQ96AJ9 217 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 UVRAGQ9P2Y5 699 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 PCYOX1Q9UHG3 505 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 CD2APQ9Y5K6 639 aa15.03■□□□□ -0
PCDHGA3-202ENST00000612467 CNTNAP2Q9UHC6 1331 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 THAP12O43422 761 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 GTF2H1P32780 548 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 NOP14P78316 857 aaKnown RBP15.02■□□□□ -0
PCDHGA3-202ENST00000612467 KRT17Q04695 432 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 ORC1Q13415 861 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 RBBP8NLQ8NC74 664 aaPredicted RBP15.02■□□□□ -0
PCDHGA3-202ENST00000612467 OTUD5Q96G74 571 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 CDHR1Q96JP9 859 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 MTMR12Q9C0I1 747 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 MTFR1LQ9H019 292 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 RASSF4Q9H2L5 321 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 ELP3Q9H9T3 547 aa15.02■□□□□ -0
PCDHGA3-202ENST00000612467 IRF6O14896 467 aa15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 ATP2A1O14983 1001 aa15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 RALAP11233 206 aa15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 MCCD1P59942 119 aaPredicted RBP15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 PPP2R2AP63151 447 aa15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 MON1BQ7L1V2 547 aa15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 PABPC3Q9H361 631 aaKnown RBP15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 RASAL2Q9UJF2 1139 aa15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 PCDHB2Q9Y5E7 798 aa15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 MCM3APO60318 1980 aa15.02□□□□□ -0.01
PCDHGA3-202ENST00000612467 A0A0B4J269 797 aa15.01□□□□□ -0.01
PCDHGA3-202ENST00000612467 DKC1O60832 514 aaKnown RBP eCLIP15.01□□□□□ -0.01
PCDHGA3-202ENST00000612467 ATG7O95352 703 aa15.01□□□□□ -0.01
PCDHGA3-202ENST00000612467 ACSL3O95573 720 aa15.01□□□□□ -0.01
PCDHGA3-202ENST00000612467 STAT5BP51692 787 aa15.01□□□□□ -0.01
PCDHGA3-202ENST00000612467 RTP1P59025 263 aa15.01□□□□□ -0.01
PCDHGA3-202ENST00000612467 DENND2CQ68D51 928 aa15.01□□□□□ -0.01
PCDHGA3-202ENST00000612467 LBX2Q6XYB7 198 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms