RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 FGFBP2Q9BYJ0 223 aa9.58□□□□□ -0.88
SMAD4-217ENST00000611848 HAPLN2Q9GZV7 340 aa9.58□□□□□ -0.88
SMAD4-217ENST00000611848 PLEKHA5Q9HAU0 1116 aa9.58□□□□□ -0.88
SMAD4-217ENST00000611848 SLC39A2Q9NP94 309 aa9.58□□□□□ -0.88
SMAD4-217ENST00000611848 MIOSQ9NXC5 875 aa9.58□□□□□ -0.88
SMAD4-217ENST00000611848 HCSTQ9UBK5 93 aa9.58□□□□□ -0.88
SMAD4-217ENST00000611848 PLAGL2Q9UPG8 496 aa9.58□□□□□ -0.88
SMAD4-217ENST00000611848 KIAA0391O15091 583 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 RRP9O43818 475 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 DDHD2O94830 711 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 KIF20AO95235 890 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 LDHAP00338 332 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 ALDH2P05091 517 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 GALTP07902 379 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 FOSL2P15408 326 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 PPP1R2P41236 205 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 BCAR1P56945 870 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 OSTNP61366 133 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 SNRPFP62306 86 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 POU5F1Q01860 360 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 DSC1Q08554 894 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 STK4Q13043 487 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 ADGRE1Q14246 886 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 KRT31Q15323 416 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 SYCP1Q15431 976 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 PTPN21Q16825 1174 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 TCP11X2Q5H9J9 407 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 ALKAL1Q6UXT8 129 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 ZNF280BQ86YH2 543 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 COLGALT2Q8IYK4 626 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 GLIS3Q8NEA6 775 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 SPPL3Q8TCT6 385 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 GDPD5Q8WTR4 605 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 SCFD1Q8WVM8 642 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 POMGNT1Q8WZA1 660 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 DHTKD1Q96HY7 919 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 PANX2Q96RD6 677 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 TSPAN18Q96SJ8 248 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 BAG1Q99933 345 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 GBP3Q9H0R5 595 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 RPF1Q9H9Y2 349 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 SPG21Q9NZD8 308 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 CGNQ9P2M7 1197 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 AGO2Q9UKV8 859 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 LZTS1Q9Y250 596 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 STXBP5LQ9Y2K9 1186 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 FAN1Q9Y2M0 1017 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 PDCD11Q14690 1871 aaKnown RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 COL4A4P53420 1690 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-217ENST00000611848 PLXNA4Q9HCM2 1894 aa9.57□□□□□ -0.88
SMAD4-217ENST00000611848 BRWD1Q9NSI6 2320 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 AKR1B15C9JRZ8 316 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 PTGESO14684 152 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 FAM189A1O60320 539 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 FGF18O76093 207 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 ITGB1P05556 798 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 IGFBP4P22692 258 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 ADSSP30520 456 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 KRT17Q04695 432 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 GOLGA8FQ08AF8 430 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 GOLGA8DPQ0D2H9 430 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 TUSC3Q13454 348 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 KNOP1Q1ED39 458 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 IRF2BP1Q8IU81 584 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 CD302Q8IX05 232 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 REXO1L1PQ8IX06 675 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 SLC39A11Q8N1S5 342 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 KIAA0895Q8NCT3 520 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 KIF18AQ8NI77 898 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 NOC3LQ8WTT2 800 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 MRPL38Q96DV4 380 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 TMEM169Q96HH4 297 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 SNX27Q96L92 541 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 PPP1R10Q96QC0 940 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 THAP9Q9H5L6 903 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 ALG13Q9NP73 1137 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 SLC38A7Q9NVC3 462 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 DNAJB4Q9UDY4 337 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 STK39Q9UEW8 545 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 PUF60Q9UHX1 559 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 CPSF3Q9UKF6 684 aaKnown RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-217ENST00000611848 MTCH2Q9Y6C9 303 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 TRANK1O15050 2925 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 SMIM28A0A1B0GU29 152 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 KCNJ18B7U540 433 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 TISP43B9A030 160 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 NT5C1B-RDH14C9J2C7 533 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 NRP1O14786 923 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 PSMA7O14818 248 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 GRM6O15303 877 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 ZSCAN12O43309 604 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 B4GALT3O60512 393 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 ADRB2P07550 413 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 KCNE1P15382 129 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 FECHP22830 423 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 HOXD13P35453 343 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 OR1G1P47890 313 aa9.56□□□□□ -0.88
SMAD4-217ENST00000611848 SLC11A1P49279 550 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms