RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 HOXA2O43364 376 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 XPOTO43592 962 aaKnown RBP17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 FGBP02675 491 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 TMEM191BP0C7N4 346 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 MLH1P40692 756 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 MYL7Q01449 175 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 SYCP1Q15431 976 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 EXOC3L4Q17RC7 722 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 TMEM240Q5SV17 173 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 DPY19L2P1Q6NXN4 242 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 GLB1LQ6UWU2 654 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 RNF169Q8NCN4 708 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 FBXL13Q8NEE6 735 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 BEST2Q8NFU1 509 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 TOP1MTQ969P6 601 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 ZFP42Q96MM3 310 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 MTMR12Q9C0I1 747 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 MMRN2Q9H8L6 949 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 PLCB1Q9NQ66 1216 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 SLC38A7Q9NVC3 462 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 RAB20Q9NX57 234 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 KANSL3Q9P2N6 904 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 LTBP2Q14767 1821 aa17.24■□□□□ 0.35
CLTCL1-207ENST00000611723 ITIH6Q6UXX5 1313 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 VNN1O95497 513 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 CST3P01034 146 aaPredicted RBP17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 AMHP03971 560 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 THP07101 528 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 PON1P27169 355 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 AFF1P51825 1210 aaKnown RBP17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 NAB2Q15742 525 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 CLLU1OSQ5K130 101 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 PSRC1Q6PGN9 363 aaPredicted RBP17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 ZNF365Q70YC5 407 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 C1orf127Q8N9H9 656 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 ANP32BQ92688 251 aaKnown RBP17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 RPS6KC1Q96S38 1066 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 LBHD1Q9BQE6 289 aaPredicted RBP17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 CRACR2AQ9BSW2 395 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 DPP3Q9NY33 737 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 ITGA11Q9UKX5 1188 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 LRFN2Q9ULH4 789 aa17.23■□□□□ 0.35
CLTCL1-207ENST00000611723 PDCD11Q14690 1871 aaKnown RBP17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 ZC3H11AO75152 810 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 HLA-DRAP01903 254 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 SLC9A1P19634 815 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 LRPAP1P30533 357 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 EPHB4P54760 987 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 WDR5P61964 334 aaKnown RBP17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 GRIK3Q13003 919 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 BIRC3Q13489 604 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 NCOA4Q13772 614 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 FIGNQ5HY92 759 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 NOMO2Q5JPE7 1267 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 GLRA4Q5JXX5 417 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 SPECC1LQ69YQ0 1117 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 HERVK_113Q902F9 699 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 SEMA4DQ92854 862 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 IQCDQ96DY2 449 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 FAM84AQ96KN4 292 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 CASD1Q96PB1 797 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 NUP58Q9BVL2 599 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 SIX4Q9UIU6 781 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 PLAGL2Q9UPG8 496 aa17.22■□□□□ 0.35
CLTCL1-207ENST00000611723 ANO9A1A5B4 782 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 PHACTR2O75167 634 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 STAU1O95793 577 aaKnown RBP17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 FGFR1P11362 822 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 ATICP31939 592 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 SCNN1GP51170 649 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 RBP5P82980 135 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 URGCPQ8TCY9 931 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 HELQQ8TDG4 1101 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 TAF4BQ92750 862 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 FAXDC2Q96IV6 333 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 EDEM3Q9BZQ6 932 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 INTS2Q9H0H0 1204 aaKnown RBP17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 VRTNQ9H8Y1 702 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 SIX2Q9NPC8 291 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 FBXL5Q9UKA1 691 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 DAAM1Q9Y4D1 1078 aa17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.21■□□□□ 0.35
CLTCL1-207ENST00000611723 PIRO00625 290 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 NOL4O94818 638 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 ASS1P00966 412 aaKnown RBP17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 RPL9P32969 192 aaKnown RBP17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 KLK7P49862 253 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 SOX4Q06945 474 aaPredicted RBP17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 TBX2Q13207 712 aaPredicted RBP17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 TRPC3Q13507 836 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 SGSM1Q2NKQ1 1148 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 KLHDC7AQ5VTJ3 777 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 C9orf57Q5W0N0 161 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 SCARA3Q6AZY7 606 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 SMYD5Q6GMV2 418 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms