RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PEX3P56589 373 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 IL9RQ01113 521 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 CCDC15Q0P6D6 951 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 PPP1R21Q6ZMI0 780 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 SYDE1Q6ZW31 735 aaPredicted RBP16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 KIFC3Q9BVG8 833 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 IDI2Q9BXS1 227 aa16.08■□□□□ 0.17
PCDHGB1-202ENST00000611598 ASMTLO95671 621 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 GCKP35557 465 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 GJC1P36383 396 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 CAV1Q03135 178 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 KLF1Q13351 362 aaPredicted RBP16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 TAF11Q15544 211 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 KRT39Q6A163 491 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 CAPRIN2Q6IMN6 1127 aaKnown RBP16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 MIER3Q7Z3K6 550 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 GLIS1Q8NBF1 620 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 KIAA1683Q9H0B3 1180 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 TXLNGQ9NUQ3 528 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 PHTF1Q9UMS5 762 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 USP20Q9Y2K6 914 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 SRCAPQ6ZRS2 3230 aa16.08■□□□□ 0.16
PCDHGB1-202ENST00000611598 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 CAPN12Q6ZSI9 719 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 ZNF365Q70YC5 407 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 MCOLN2Q8IZK6 566 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 PARD3BQ8TEW8 1205 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 GRAMD1AQ96CP6 724 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 RBM15Q96T37 977 aaKnown RBP eCLIP16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 LRMDAQ9H2I8 198 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 PEX11AO75192 247 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 FDX1P10109 184 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 MAN1A1P33908 653 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 PEX19P40855 299 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 MAGEA4P43358 317 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 CCNG1P51959 295 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 GTF2BQ00403 316 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 SPP2Q13103 211 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 MOGSQ13724 837 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 STAT4Q14765 748 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 FASTKD3Q14CZ7 662 aaKnown RBP16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 VPS72Q15906 364 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 CDCA2Q69YH5 1023 aaPredicted RBP16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 TRIM68Q6AZZ1 485 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 ZNF449Q6P9G9 518 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 TRABD2AQ86V40 505 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 ANKRD35Q8N283 1001 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 NT5C1BQ96P26 610 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 RAB3IPQ96QF0 476 aaPredicted RBP16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 ACTL7BQ9Y614 415 aa16.07■□□□□ 0.16
PCDHGB1-202ENST00000611598 PMM2O15305 246 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 WFS1O76024 890 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 UNGP13051 313 aaPredicted RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 GNAZP19086 355 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 GPC3P51654 580 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 TAS2R40P59535 323 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 BLMHQ13867 455 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 P3H1Q32P28 736 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 C4orf33Q8N1A6 199 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 FAM13CQ8NE31 585 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 TMEM174Q8WUU8 243 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 RNPEPL1Q9HAU8 725 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 LY75O60449 1722 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 EXOC1LA0A1B0GW35 172 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 POC1B-GALNT4F8VUJ3 575 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 CBX6O95503 412 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 T-ENOLP0DO92 83 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 CD58P19256 250 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 YARSP54577 528 aaKnown RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 GRIK3Q13003 919 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 ALCAMQ13740 583 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 SETDB1Q15047 1291 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 PKN2Q16513 984 aaKnown RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 IL31RAQ8NI17 732 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 DENND1AQ8TEH3 1009 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 MAIP1Q8WWC4 291 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 SLC7A6OSQ96CW6 309 aaPredicted RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 MRRFQ96E11 262 aaKnown RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 NAF1Q96HR8 494 aaKnown RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 LRRC37BQ96QE4 947 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 CCDC77Q9BR77 488 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 TDRD3Q9H7E2 651 aaKnown RBP16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 TMEM8AQ9HCN3 771 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 SAYSD1Q9NPB0 183 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 KLHL11Q9NVR0 708 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 RAB20Q9NX57 234 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 STARD13Q9Y3M8 1113 aa16.06■□□□□ 0.16
PCDHGB1-202ENST00000611598 ZSCAN5DPP0CG00 497 aa16.05■□□□□ 0.16
PCDHGB1-202ENST00000611598 MAPTP10636 758 aaKnown RBP16.05■□□□□ 0.16
PCDHGB1-202ENST00000611598 FGFR1P11362 822 aa16.05■□□□□ 0.16
PCDHGB1-202ENST00000611598 EPHB2P29323 1055 aa16.05■□□□□ 0.16
PCDHGB1-202ENST00000611598 ZYXQ15942 572 aaKnown RBP16.05■□□□□ 0.16
PCDHGB1-202ENST00000611598 FBXL13Q8NEE6 735 aa16.05■□□□□ 0.16
PCDHGB1-202ENST00000611598 KIFAP3Q92845 792 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms