RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 TPGS2Q68CL5 300 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 SLC8B1Q6J4K2 584 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 YAF2Q8IY57 180 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 LEMD2Q8NC56 503 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 FAM3CQ92520 227 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 NELL1Q92832 810 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 CNTNAP3BQ96NU0 1288 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 TCHPQ9BT92 498 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 CNTNAP3Q9BZ76 1288 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 CCDC113Q9H0I3 377 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 LMAN1LQ9HAT1 526 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 PRMT8Q9NR22 394 aaPredicted RBP17.35■□□□□ 0.37
HDDC2-210ENST00000609574 MAFFQ9ULX9 164 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 USP20Q9Y2K6 914 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 STK24Q9Y6E0 443 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 PHLPP2Q6ZVD8 1323 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 FRYLO94915 3013 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 CCDC169A6NNP5 214 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 ZNF263O14978 683 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 DTNBO60941 627 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 ABLIM3O94929 683 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 FDPSP14324 419 aaKnown RBP17.34■□□□□ 0.37
HDDC2-210ENST00000609574 PSMC3P17980 439 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 GDI1P31150 447 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 RPL9P32969 192 aaKnown RBP17.34■□□□□ 0.37
HDDC2-210ENST00000609574 BRCC3P46736 316 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 GRM2Q14416 872 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 SLC5A9Q2M3M2 681 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 FAM78AQ5JUQ0 283 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 LAIR1Q6GTX8 287 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 C1orf228Q6PIY5 440 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 MAMSTRQ6ZN01 415 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 PRR23BQ6ZRT6 265 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 TCEAL8Q8IYN2 117 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 NECAB1Q8N987 351 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 APPL2Q8NEU8 664 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 BSNDQ8WZ55 320 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 E2F7Q96AV8 911 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 GPR88Q9GZN0 384 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 CXCL16Q9H2A7 254 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 TRPV5Q9NQA5 729 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 TNFSF13BQ9Y275 285 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 DNAH14Q0VDD8 3507 aa17.34■□□□□ 0.37
HDDC2-210ENST00000609574 DCDC2BA2VCK2 349 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 PODXLO00592 558 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 CCT6AP40227 531 aaKnown RBP17.33■□□□□ 0.36
HDDC2-210ENST00000609574 GRM5P41594 1212 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 CXCL12P48061 93 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 ORC2Q13416 577 aaPredicted RBP17.33■□□□□ 0.36
HDDC2-210ENST00000609574 GNL2Q13823 731 aaKnown RBP17.33■□□□□ 0.36
HDDC2-210ENST00000609574 CTXN3Q4LDR2 81 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 NT5DC1Q5TFE4 455 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 CSGALNACT1Q8TDX6 532 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 DEPDC1BQ8WUY9 529 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 SMARCD2Q92925 531 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 ACAP3Q96P50 834 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 MRPL4Q9BYD3 311 aaKnown RBP17.33■□□□□ 0.36
HDDC2-210ENST00000609574 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 CHRDQ9H2X0 955 aa17.33■□□□□ 0.36
HDDC2-210ENST00000609574 ZNF334Q9HCZ1 680 aaPredicted RBP17.33■□□□□ 0.36
HDDC2-210ENST00000609574 WDR27A2RRH5 827 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 FOXD2O60548 495 aaPredicted RBP17.32■□□□□ 0.36
HDDC2-210ENST00000609574 RETP07949 1114 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 OR52Z1P0C646 297 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 MYL4P12829 197 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 ANAPC15P60006 121 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 OSTNP61366 133 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 LRRC32Q14392 662 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 ZNF568Q3ZCX4 644 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 PRSS36Q5K4E3 855 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 ZNF280DQ6N043 979 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 FAM200AQ8TCP9 573 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 GTF3C6Q969F1 213 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 MSANTD3Q96H12 275 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 ASB16Q96NS5 453 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 KIFC3Q9BVG8 833 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 SLITRK6Q9H5Y7 841 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 GOLGA2P5Q9HBQ8 144 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 ASAH2Q9NR71 780 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 INSL5Q9Y5Q6 135 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 PIAS3Q9Y6X2 628 aa17.32■□□□□ 0.36
HDDC2-210ENST00000609574 MIA3Q5JRA6 1907 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 TPRP12270 2363 aaKnown RBP17.31■□□□□ 0.36
HDDC2-210ENST00000609574 LRP3O75074 770 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 CNR2P34972 360 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 KPNA1P52294 538 aaPredicted RBP17.31■□□□□ 0.36
HDDC2-210ENST00000609574 SPEM2Q0P670 501 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 DMP1Q13316 513 aaPredicted RBP17.31■□□□□ 0.36
HDDC2-210ENST00000609574 PLD1Q13393 1074 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 SIM2Q14190 667 aaPredicted RBP17.31■□□□□ 0.36
HDDC2-210ENST00000609574 ZNF174Q15697 407 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 NETO1Q8TDF5 533 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 TCEAL4Q96EI5 215 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 CHAMP1Q96JM3 812 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 ACO2Q99798 780 aaKnown RBP17.31■□□□□ 0.36
HDDC2-210ENST00000609574 RAB34Q9BZG1 259 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 BHMT2Q9H2M3 363 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 AFF4Q9UHB7 1163 aaKnown RBP17.31■□□□□ 0.36
HDDC2-210ENST00000609574 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
HDDC2-210ENST00000609574 FBXL5Q9UKA1 691 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms