RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 EIF2B4Q9UI10 523 aaKnown RBP2.44□□□□□ -2.02
ITGB5-213ENST00000608945 DNM3Q9UQ16 869 aa2.44□□□□□ -2.02
ITGB5-213ENST00000608945 EPN1Q9Y6I3 576 aaPredicted RBP2.44□□□□□ -2.02
ITGB5-213ENST00000608945 KLHL33A6NCF5 533 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 TRIM75PA6NK02 468 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 TEX33O43247 280 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 MT-CO1P00395 513 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 SNRPA1P09661 255 aaKnown RBP2.43□□□□□ -2.02
ITGB5-213ENST00000608945 SPATA31D3P0C874 917 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 IL2RBP14784 551 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 GSPT1P15170 499 aaKnown RBP2.43□□□□□ -2.02
ITGB5-213ENST00000608945 AGXTP21549 392 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 PLA2G5P39877 138 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 MTNR1BP49286 362 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 MXRA7P84157 204 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 AMPD3Q01432 767 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 FOXI1Q12951 378 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 MTMR1Q13613 665 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 FAM214AQ32MH5 1076 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 C11orf87Q6NUJ2 197 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 EFCAB12Q6NXP0 572 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 SPATA31D4Q6ZUB0 917 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 KCNK18Q7Z418 384 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 FAM177A1Q8N128 213 aaPredicted RBP2.43□□□□□ -2.02
ITGB5-213ENST00000608945 PQLC1Q8N2U9 271 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 C1orf162Q8NEQ5 155 aaPredicted RBP2.43□□□□□ -2.02
ITGB5-213ENST00000608945 OR7D4Q8NG98 312 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 ZFP28Q8NHY6 868 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 MDM1Q8TC05 714 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 TSPEARQ8WU66 669 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 TFAP2CQ92754 450 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 CYFIP2Q96F07 1278 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 DCLRE1CQ96SD1 692 aaKnown RBP2.43□□□□□ -2.02
ITGB5-213ENST00000608945 MNTQ99583 582 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 C7orf25Q9BPX7 421 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 REXO4Q9GZR2 422 aaKnown RBP2.43□□□□□ -2.02
ITGB5-213ENST00000608945 BCO1Q9HAY6 547 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 HOMER2Q9NSB8 354 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 TRHDEQ9UKU6 1024 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 NOP58Q9Y2X3 529 aaKnown RBP2.43□□□□□ -2.02
ITGB5-213ENST00000608945 SPEF1Q9Y4P9 236 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 PCDHGA2Q9Y5H1 932 aa2.43□□□□□ -2.02
ITGB5-213ENST00000608945 XDHP47989 1333 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 LRRC3CA6NJW4 275 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 DIRC3C9JPN6 131 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 TRIM24O15164 1050 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 PJA2O43164 708 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 KATNA1O75449 491 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 STC2O76061 302 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 RAP2AP10114 183 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 RBP3P10745 1247 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 IARSP41252 1262 aaKnown RBP2.42□□□□□ -2.02
ITGB5-213ENST00000608945 MCAMP43121 646 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 CDKN1CP49918 316 aaPredicted RBP2.42□□□□□ -2.02
ITGB5-213ENST00000608945 IGBP1P78318 339 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 KRT85P78386 507 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 CREMQ03060 361 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 OCA2Q04671 838 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 MGAT2Q10469 447 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 SP140Q13342 867 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 VPS72Q15906 364 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 FAM47AQ5JRC9 791 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 RRP12Q5JTH9 1297 aaKnown RBP2.42□□□□□ -2.02
ITGB5-213ENST00000608945 PRAMEF14Q5SWL7 426 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 EFCAB2Q5VUJ9 269 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 NAIF1Q69YI7 327 aaPredicted RBP2.42□□□□□ -2.02
ITGB5-213ENST00000608945 PPP4R3AQ6IN85 833 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 SAMD14Q8IZD0 417 aaPredicted RBP2.42□□□□□ -2.02
ITGB5-213ENST00000608945 PPM1NQ8N819 430 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 CPT1CQ8TCG5 803 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 HDAC10Q969S8 669 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 FAXDC2Q96IV6 333 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 SMAD5Q99717 465 aaKnown RBP2.42□□□□□ -2.02
ITGB5-213ENST00000608945 ENKD1Q9H0I2 346 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 DMRT3Q9NQL9 472 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 ZNF277Q9NRM2 450 aaPredicted RBP2.42□□□□□ -2.02
ITGB5-213ENST00000608945 SORCS3Q9UPU3 1222 aa2.42□□□□□ -2.02
ITGB5-213ENST00000608945 SHROOM4Q9ULL8 1493 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 ZMYM3Q14202 1370 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 KLRG2A4D1S0 409 aaPredicted RBP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 TBKBP1A7MCY6 615 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 GRXCR1A8MXD5 290 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 ADCY6O43306 1168 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 DTNBO60941 627 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 NDUFS2O75306 463 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 SCAF4O95104 1147 aaKnown RBP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 SNUPNO95149 360 aaKnown RBP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 HLA-DOAP06340 250 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 ALAS1P13196 640 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 ATP5JP18859 108 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 CCKARP32238 428 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 SREBF1P36956 1147 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 RABGGTBP53611 331 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 CLRN1P58418 232 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 EVA1CP58658 441 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 PTPN21Q16825 1174 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 ABCB5Q2M3G0 1257 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 ATXN7L2Q5T6C5 722 aaPredicted RBP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 DRICH1Q6PGQ1 229 aaPredicted RBP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 HTR3DQ70Z44 454 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms