RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 IQCEQ6IPM2 695 aa12.48□□□□□ -0.41
CTCFL-221ENST00000608903 SPOPLQ6IQ16 392 aa12.48□□□□□ -0.41
CTCFL-221ENST00000608903 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
CTCFL-221ENST00000608903 PLEKHA5Q9HAU0 1116 aa12.48□□□□□ -0.41
CTCFL-221ENST00000608903 APOBEC3GQ9HC16 384 aaKnown RBP12.48□□□□□ -0.41
CTCFL-221ENST00000608903 NLRC4Q9NPP4 1024 aa12.48□□□□□ -0.41
CTCFL-221ENST00000608903 RAB20Q9NX57 234 aa12.48□□□□□ -0.41
CTCFL-221ENST00000608903 CNTN3Q9P232 1028 aa12.48□□□□□ -0.41
CTCFL-221ENST00000608903 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.48□□□□□ -0.412e-7■■□□□ 12.1
CTCFL-221ENST00000608903 SMIM28A0A1B0GU29 152 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 ENPP3O14638 875 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 STX10O60499 249 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 N4BP1O75113 896 aaKnown RBP12.47□□□□□ -0.41
CTCFL-221ENST00000608903 UCHL3P15374 230 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 IBSPP21815 317 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-221ENST00000608903 SOX4Q06945 474 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-221ENST00000608903 DUOXA2Q1HG44 320 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 DEFB128Q7Z7B8 93 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 ECHDC2Q86YB7 292 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 TMEM139Q8IV31 216 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 FBXL13Q8NEE6 735 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 NEK11Q8NG66 645 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 HELQQ8TDG4 1101 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 GAD1Q99259 594 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 GPR88Q9GZN0 384 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-221ENST00000608903 TUBGCP4Q9UGJ1 667 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-221ENST00000608903 PPEF2O14830 753 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 PNMA6AP0CW24 399 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-221ENST00000608903 CAPN2P17655 700 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 TRIM21P19474 475 aaKnown RBP12.47□□□□□ -0.41
CTCFL-221ENST00000608903 KRT9P35527 623 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 MYL6P60660 151 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 BIRC3Q13489 604 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 TMEM132DQ14C87 1099 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 NAB2Q15742 525 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 RRAGAQ7L523 313 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 APBB1IPQ7Z5R6 666 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-221ENST00000608903 USP37Q86T82 979 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 PPFIBP1Q86W92 1011 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 KREMEN1Q96MU8 473 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 NUP58Q9BVL2 599 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 XYLT2Q9H1B5 865 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 CACNG4Q9UBN1 327 aa12.47□□□□□ -0.41
CTCFL-221ENST00000608903 A0A1W2PQJ5 194 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 AKR1B15C9JRZ8 316 aaPredicted RBP12.46□□□□□ -0.41
CTCFL-221ENST00000608903 TIMP1P01033 207 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 ITGA4P13612 1032 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 KCNE1P15382 129 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 MLH1P40692 756 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 WDR59Q6PJI9 974 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 CCDC150Q8NCX0 1101 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 PRDM5Q9NQX1 630 aaPredicted RBP12.46□□□□□ -0.41
CTCFL-221ENST00000608903 CEP72Q9P209 647 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 DNAJC12Q9UKB3 198 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 C2CD2Q9Y426 696 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 NUB1Q9Y5A7 615 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 SCN1AP35498 2009 aa12.46□□□□□ -0.41
CTCFL-221ENST00000608903 PIK3CAP42336 1068 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 YARSP54577 528 aaKnown RBP12.46□□□□□ -0.42
CTCFL-221ENST00000608903 JAM2P57087 298 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 NCOA4Q13772 614 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 PDXDC1Q6P996 788 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 CD302Q8IX05 232 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 CRIPAKQ8N1N5 446 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 RNF169Q8NCN4 708 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 C16orf45Q96MC5 204 aaPredicted RBP12.46□□□□□ -0.42
CTCFL-221ENST00000608903 PPP1R10Q96QC0 940 aaKnown RBP12.46□□□□□ -0.42
CTCFL-221ENST00000608903 DNAJC7Q99615 494 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 ARID3AQ99856 593 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 GOLGA2P5Q9HBQ8 144 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 DPP3Q9NY33 737 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 APEX2Q9UBZ4 518 aa12.46□□□□□ -0.42
CTCFL-221ENST00000608903 ARL5CA6NH57 179 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 LRRC53A6NM62 1247 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 ITGB3P05106 788 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 TMEM191BP0C7N4 346 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 CSF2RAP15509 400 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 AP3M2P53677 418 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 ZBED6P86452 979 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 CLLU1OSQ5K130 101 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 SLC24A5Q71RS6 500 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 SEPT8Q92599 483 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 UBE2TQ9NPD8 197 aaPredicted RBP12.45□□□□□ -0.42
CTCFL-221ENST00000608903 ABHD10Q9NUJ1 306 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 LUC7L2Q9Y383 392 aaKnown RBP12.45□□□□□ -0.42
CTCFL-221ENST00000608903 TTC3P53804 2025 aa12.45□□□□□ -0.42
CTCFL-221ENST00000608903 B4GALT3O60512 393 aa12.44□□□□□ -0.42
CTCFL-221ENST00000608903 PHACTR2O75167 634 aa12.44□□□□□ -0.42
CTCFL-221ENST00000608903 ASS1P00966 412 aaKnown RBP12.44□□□□□ -0.42
CTCFL-221ENST00000608903 TNNC2P02585 160 aa12.44□□□□□ -0.42
CTCFL-221ENST00000608903 FGFR1P11362 822 aa12.44□□□□□ -0.42
CTCFL-221ENST00000608903 FECHP22830 423 aa12.44□□□□□ -0.42
CTCFL-221ENST00000608903 POLR2BP30876 1174 aaKnown RBP12.44□□□□□ -0.42
CTCFL-221ENST00000608903 GATMP50440 423 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms