RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 RAD51AP2Q09MP3 1159 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 VARS2Q5ST30 1063 aaKnown RBP14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 MCTP1Q6DN14 999 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 SLC8B1Q6J4K2 584 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 MPZL3Q6UWV2 235 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 C1orf210Q8IVY1 113 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 NPAS3Q8IXF0 933 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 PJA1Q8NG27 643 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 KCNG4Q8TDN1 519 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 C18orf25Q96B23 403 aaPredicted RBP14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 PLIN2Q99541 437 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 R4GN57 208 aa14.65□□□□□ -0.06
POLR2J3-219ENST00000608621 DMDP11532 3685 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 KANSL1LA0AUZ9 987 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 WDR27A2RRH5 827 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 H7C4K7 107 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 SYN3O14994 580 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 MEFVO15553 781 aaPredicted RBP14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 TBC1D4O60343 1298 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 LRG1P02750 347 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 RHOP08100 348 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 GUCY2CP25092 1073 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 RPL9P32969 192 aaKnown RBP14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 STRN3Q13033 797 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 MRPL58Q14197 206 aaKnown RBP14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 SLC10A6Q3KNW5 377 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 SEZ6Q53EL9 994 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 POTEHQ6S545 545 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 SYT2Q8N9I0 419 aaPredicted RBP14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 SPIRE2Q8WWL2 714 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 PNMA5Q96PV4 448 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 TIPINQ9BVW5 301 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 PLA2G2FQ9BZM2 168 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 SEMA4AQ9H3S1 761 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 CNTN3Q9P232 1028 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 KCNG1Q9UIX4 513 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 NUB1Q9Y5A7 615 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 CACNA1IQ9P0X4 2223 aa14.64□□□□□ -0.07
POLR2J3-219ENST00000608621 CITO14578 2027 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 ARHGEF37A1IGU5 675 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 PRRG1O14668 218 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 TOM1L1O75674 476 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 SEC24AO95486 1093 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 LMNAP02545 664 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 SP9P0CG40 484 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 PLS3P13797 630 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 ATF2P15336 505 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 CD72P21854 359 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 SMTNP53814 917 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 ATP2C1P98194 919 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 PRKCQQ04759 706 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 MLF2Q15773 248 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 SLC5A9Q2M3M2 681 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 RILPL1Q5EBL4 403 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 HYIQ5T013 277 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 TMEM161BQ8NDZ6 487 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 CORO1BQ9BR76 489 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 DDX23Q9BUQ8 820 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 CYP4F11Q9HBI6 524 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 AVENQ9NQS1 362 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 FBXL5Q9UKA1 691 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 MTF2Q9Y483 593 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 KIF3AQ9Y496 699 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 VPS13AQ96RL7 3174 aa14.63□□□□□ -0.07
POLR2J3-219ENST00000608621 VWA3AA6NCI4 1184 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 FAM170BA6NMN3 283 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 MAPTP10636 758 aaKnown RBP14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 CEBPBP17676 345 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 PFKPQ01813 784 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 UBXN2BQ14CS0 331 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 C8orf34Q49A92 452 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 CTXN3Q4LDR2 81 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 TANGO2Q6ICL3 276 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 TCEAL8Q8IYN2 117 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 TCEAL4Q96EI5 215 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 SUSD3Q96L08 255 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 TBC1D32Q96NH3 1257 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 GDE1Q9NZC3 331 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 ANKFY1Q9P2R3 1169 aa14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 EP300Q09472 2414 aaPredicted RBP14.62□□□□□ -0.07
POLR2J3-219ENST00000608621 NPHP3-ACAD11A0A0J9YXS1 232 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 CLDN3O15551 220 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 ECI2O75521 394 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 PLA2G4BP0C869 781 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 MARCKSP29966 332 aaPredicted RBP14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 MCM4P33991 863 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 MATR3P43243 847 aaKnown RBP eCLIP14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 SLC12A3P55017 1021 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 SPAG1Q07617 926 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 MCL1Q07820 350 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 NOLC1Q14978 699 aaKnown RBP eCLIP14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 TPGS2Q68CL5 300 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 ZPBP2Q6X784 338 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 MAML2Q8IZL2 1156 aaPredicted RBP14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 TMEM130Q8N3G9 435 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 DDX12PQ92771 950 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 CDK5RAP3Q96JB5 506 aa14.61□□□□□ -0.07
POLR2J3-219ENST00000608621 BCO2Q9BYV7 579 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms