RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	TTC26	A0AVF1	554 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	CASTOR2	A6NHX0	329 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	C2CD2L	O14523	706 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	B3GAT3	O94766	335 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	CLTA	P09496	248 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	CYP3A5	P20815	502 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	NASP	P49321	788 aa	Predicted RBP	11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	CLCNKB	P51801	687 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	SOX4	Q06945	474 aa	Predicted RBP	11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	MRPL58	Q14197	206 aa	Known RBP	11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	KARS	Q15046	597 aa	Known RBP	11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	FAM171A1	Q5VUB5	890 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	SLC8B1	Q6J4K2	584 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	USP49	Q70CQ1	688 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	GPBP1	Q86WP2	473 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	FBXL6	Q8N531	539 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	KREMEN2	Q8NCW0	462 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	EPSTI1	Q96J88	318 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	B3GALT6	Q96L58	329 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	PLIN2	Q99541	437 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	TCHP	Q9BT92	498 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	APOL5	Q9BWW9	433 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	PRKD2	Q9BZL6	878 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	HAPLN2	Q9GZV7	340 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	MAN1C1	Q9NR34	630 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	MTRR	Q9UBK8	725 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	FBXW11	Q9UKB1	542 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559	TBX20	Q9UMR3	447 aa		11.72	□□□□□ -0.53
TPM2-208	ENST00000607559		A0A0B4J269	797 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	VPS37C	A5D8V6	355 aa	Predicted RBP	11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	SYN3	O14994	580 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	STX6	O43752	255 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	TRAK2	O60296	914 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	ZMYND10	O75800	440 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	LIG1	P18858	919 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	PAX3	P23760	479 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	IGFBP6	P24592	240 aa	Predicted RBP	11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	CA8	P35219	290 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	PTPN5	P54829	565 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	RAD51AP2	Q09MP3	1159 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	MCM6	Q14566	821 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	ZRSR1	Q15695	479 aa	Known RBP	11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	PSMD5	Q16401	504 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	CCDC149	Q6ZUS6	474 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	ANKS3	Q6ZW76	656 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	ZNF720	Q7Z2F6	126 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	ZBTB33	Q86T24	672 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	ALYREF	Q86V81	257 aa	Known RBP	11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	MAP4K3	Q8IVH8	894 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	C3orf58	Q8NDZ4	430 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	FEZF2	Q8TBJ5	459 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	RABGGTA	Q92696	567 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	NXPE3	Q969Y0	559 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	ACSF2	Q96CM8	615 aa	Predicted RBP	11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	KRTAP3-3	Q9BYR6	98 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	KRTAP3-2	Q9BYR7	98 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	EPS15L1	Q9UBC2	864 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	CACNG4	Q9UBN1	327 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	SEL1L	Q9UBV2	794 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	MAFF	Q9ULX9	164 aa		11.71	□□□□□ -0.53
TPM2-208	ENST00000607559	N4BP1	O75113	896 aa	Known RBP	11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	RFPL2	O75678	378 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	ABLIM3	O94929	683 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	WEE2	P0C1S8	567 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	LRPAP1	P30533	357 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	AARS	P49588	968 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	MRE11	P49959	708 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	PALB2	Q86YC2	1186 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	TDRD5	Q8NAT2	981 aa	Known RBP	11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	DNAJC19	Q96DA6	116 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	SUSD3	Q96L08	255 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	USP28	Q96RU2	1077 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	IRF2BPL	Q9H1B7	796 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	IGSF9	Q9P2J2	1179 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	CCDC39	Q9UFE4	941 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	LIMD1	Q9UGP4	676 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	FAM186A	A6NE01	2351 aa		11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	TDRD15	B5MCY1	1934 aa	Known RBP	11.7	□□□□□ -0.54
TPM2-208	ENST00000607559	FRMD3	A2A2Y4	597 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	OGT	O15294	1046 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	ADAM12	O43184	909 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	PPP6R2	O75170	966 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	FAM13A	O94988	1023 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	RPL17	P18621	184 aa	Known RBP	11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	MARCKS	P29966	332 aa	Predicted RBP	11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	MTMR3	Q13615	1198 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	GLRA4	Q5JXX5	417 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	FAM173B	Q6P4H8	233 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	CNNM4	Q6P4Q7	775 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	SLC39A4	Q6P5W5	647 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	CD302	Q8IX05	232 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	MYCT1	Q8N699	235 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	KRI1	Q8N9T8	703 aa	Known RBP	11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms