RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 MAN2A1Q16706 1144 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 PABPC1LQ4VXU2 614 aaKnown RBP5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 SGO2Q562F6 1265 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 SPATA1Q5VX52 437 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 FBXL13Q8NEE6 735 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 UCMAQ8WVF2 138 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 CASP10Q92851 521 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 LPPQ93052 612 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 EEF2KMTQ96G04 330 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 CNOT6LQ96LI5 555 aaKnown RBP5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 TSPAN18Q96SJ8 248 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 TCF25Q9BQ70 676 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 PLEKHA5Q9HAU0 1116 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 NLRC4Q9NPP4 1024 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 IPPQ9Y573 584 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 CEP290O15078 2479 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 KCNJ18B7U540 433 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 ADAMTS4O75173 837 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 APOEP02649 317 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 ITGB3P05106 788 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 KRT10P13645 584 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 ERCC5P28715 1186 aaPredicted RBP5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 KLHL30Q0D2K2 578 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 SFSWAPQ12872 951 aaKnown RBP5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 GRB10Q13322 594 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 TRIM14Q14142 442 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 KCNJ12Q14500 433 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 ARL13BQ3SXY8 428 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 ZC2HC1CQ53FD0 456 aaPredicted RBP5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 SCYL2Q6P3W7 929 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 TOGARAM2Q6ZUX3 1019 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 ENOSF1Q7L5Y1 443 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 LRRC8AQ8IWT6 810 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 ETNPPLQ8TBG4 499 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 UBE2Q2Q8WVN8 375 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 TSC1Q92574 1164 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 TTPALQ9BTX7 342 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 UBE2TQ9NPD8 197 aaPredicted RBP5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 PDLIM7Q9NR12 457 aa5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCARNA15-201ENST00000607520 COL11A2P13942 1736 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 DDX60Q8IY21 1712 aaKnown RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ARFGEF1Q9Y6D6 1849 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 PABPN1LA6NDY0 278 aaKnown RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ST8SIA6P61647 398 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 CAPSQ13938 189 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 PREPLQ4J6C6 727 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 LMBRD2Q68DH5 695 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 KCNT2Q6UVM3 1135 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 LRRC31Q6UY01 552 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 C11orf57Q6ZUT1 292 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ANO5Q75V66 913 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ECHDC2Q86YB7 292 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ARHGAP18Q8N392 663 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ASAP3Q8TDY4 903 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 RUFY1Q96T51 708 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 POP1Q99575 1024 aaKnown RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 NT5C1AQ9BXI3 368 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ATXN3LQ9H3M9 355 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ASAH2Q9NR71 780 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 FAM207AQ9NSI2 230 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 MRPS17Q9Y2R5 130 aaKnown RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 PCDHA11Q9Y5I1 949 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 C22orf31O95567 290 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 CXCL8P10145 99 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 EEF1GP26641 437 aaKnown RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 KIF11P52732 1056 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 HADHQ16836 314 aaKnown RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 SFMBT2Q5VUG0 894 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 RYBPQ8N488 228 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 IGSF22Q8N9C0 903 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 KLHDC9Q8NEP7 349 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 MTMR9Q96QG7 549 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 BAG1Q99933 345 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 PDE11AQ9HCR9 933 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 LMCD1Q9NZU5 365 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 GCNT4Q9P109 453 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 QSER1Q2KHR3 1735 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 TMEM110-MUSTN1A8MSY1 372 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 KIAA0355O15063 1070 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 CCDC175P0C221 793 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 MNX1P50219 401 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 NUBP1P53384 320 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 SEZ6Q53EL9 994 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 SUGP1Q8IWZ8 645 aaKnown RBP5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 TMEM192Q8IY95 271 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 TMEM35BQ8NCS4 154 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 HAS1Q92839 578 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 HSD17B14Q9BPX1 270 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.51□□□□□ -1.533e-7■■■□□ 14.8
SCARNA15-201ENST00000607520 TUBGCP2Q9BSJ2 902 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 ZNF576Q9H609 170 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 STAP1Q9ULZ2 295 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 MYH1P12882 1939 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 FRMPD4Q14CM0 1322 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 CASP8AP2Q9UKL3 1982 aa5.51□□□□□ -1.53
SCARNA15-201ENST00000607520 CA3P07451 260 aa5.5□□□□□ -1.53
SCARNA15-201ENST00000607520 FAM200BP0CF97 657 aa5.5□□□□□ -1.53
SCARNA15-201ENST00000607520 ARF4P18085 180 aaPredicted RBP5.5□□□□□ -1.53
SCARNA15-201ENST00000607520 NOVP48745 357 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms