RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MIIPQ5JXC2 388 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 CBWD5Q5RIA9 395 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 TDRD10Q5VZ19 366 aaKnown RBP8.31□□□□□ -1.08
MSH6-211ENST00000606499 APTXQ7Z2E3 356 aaKnown RBP8.31□□□□□ -1.08
MSH6-211ENST00000606499 CD302Q8IX05 232 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 CMTR2Q8IYT2 770 aaKnown RBP8.31□□□□□ -1.08
MSH6-211ENST00000606499 TDHQ8IZJ6 230 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 LRRC43Q8N309 656 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 C1orf127Q8N9H9 656 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 PHOSPHO2Q8TCD6 241 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 PAAF1Q9BRP4 392 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 TUBGCP2Q9BSJ2 902 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 MRPL9Q9BYD2 267 aaKnown RBP8.31□□□□□ -1.08
MSH6-211ENST00000606499 VPS16Q9H269 839 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 CWH43Q9H720 699 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 INTS13Q9NVM9 706 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 LIMA1Q9UHB6 759 aaKnown RBP8.31□□□□□ -1.08
MSH6-211ENST00000606499 DERAQ9Y315 318 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 C2CD2Q9Y426 696 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.31□□□□□ -1.08
MSH6-211ENST00000606499 MRPL42Q9Y6G3 142 aaKnown RBP8.31□□□□□ -1.08
MSH6-211ENST00000606499 EYSQ5T1H1 3165 aa8.31□□□□□ -1.08
MSH6-211ENST00000606499 PES1O00541 588 aaKnown RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 ARHGEF15O94989 841 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 VNN1O95497 513 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 TNNC2P02585 160 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 AFPP02771 609 aaKnown RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 CDK11BP21127 795 aaKnown RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 IGFBP6P24592 240 aaPredicted RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 PBX2P40425 430 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 SLC11A1P49279 550 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 MXI1P50539 228 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 CLCNKBP51801 687 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 COPB1P53618 953 aaKnown RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 TPM4P67936 248 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 MYL7Q01449 175 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 ENPEPQ07075 957 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 DSC1Q08554 894 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 TUSC3Q13454 348 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 BIRC3Q13489 604 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 MAN2A1Q16706 1144 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 DUOXA2Q1HG44 320 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 ZACNQ401N2 412 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 C15orf39Q6ZRI6 1047 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 SV2AQ7L0J3 742 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 TRAPPC11Q7Z392 1133 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 SPRED2Q7Z698 418 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 USP37Q86T82 979 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 C3orf58Q8NDZ4 430 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 BEST2Q8NFU1 509 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 CXorf38Q8TB03 319 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 SP7Q8TDD2 431 aaPredicted RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 ELMO3Q96BJ8 720 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 ANKRD36BP1Q96IX9 119 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 RAD9AQ99638 391 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 NDST4Q9H3R1 872 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 NRDE2Q9H7Z3 1164 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.3□□□□□ -1.089e-11■■■■■ 86.5
MSH6-211ENST00000606499 SLC38A7Q9NVC3 462 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 DPP3Q9NY33 737 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 SIX4Q9UIU6 781 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 UBQLN1Q9UMX0 589 aaKnown RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 YBX2Q9Y2T7 364 aaKnown RBP8.3□□□□□ -1.08
MSH6-211ENST00000606499 INSL6Q9Y581 213 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 ATG2AQ2TAZ0 1938 aa8.3□□□□□ -1.08
MSH6-211ENST00000606499 SCN1AP35498 2009 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 LINC01553A4QN01 128 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 NT5C1B-RDH14C9J2C7 533 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 PODXLO00592 558 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 AP5Z1O43299 807 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 XPOTO43592 962 aaKnown RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 STX10O60499 249 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 PHACTR2O75167 634 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 LRRN2O75325 713 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 KIF4AO95239 1232 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 SERPINC1P01008 464 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 HLA-DRAP01903 254 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 C4BPAP04003 597 aaKnown RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 ITGB1P05556 798 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 CA3P07451 260 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 KRT19P08727 400 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 LINC00271P0C7V0 271 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 CYP3A5P20815 502 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 POLR2BP30876 1174 aaKnown RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 PIK3CAP42336 1068 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 OR1G1P47890 313 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 FMO5P49326 533 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 BCAR1P56945 870 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 FANCCQ00597 558 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 PTPN21Q16825 1174 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 UPP1Q16831 310 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 VWA3BQ502W6 1294 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 SPOUT1Q5T280 376 aaKnown RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 C9orf57Q5W0N0 161 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 TMEM173Q86WV6 379 aaPredicted RBP8.29□□□□□ -1.08
MSH6-211ENST00000606499 NT5DC4Q86YG4 428 aa8.29□□□□□ -1.08
MSH6-211ENST00000606499 COLGALT2Q8IYK4 626 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms