RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 PHOSPHO2Q8TCD6 241 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 DENND1AQ8TEH3 1009 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 FERMT2Q96AC1 680 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 LRRC59Q96AG4 307 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 HES6Q96HZ4 224 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 LRGUKQ96M69 825 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 SEC62Q99442 399 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 MPHOSPH9Q99550 1183 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 SDF4Q9BRK5 362 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 SPZ1Q9BXG8 430 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 NUSAP1Q9BXS6 441 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 SLITRK6Q9H5Y7 841 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 AKAP7Q9P0M2 348 aaPredicted RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 TRIM33Q9UPN9 1127 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 TLL2Q9Y6L7 1015 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 MAGEB16A2A368 324 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 LRRIQ3A6PVS8 624 aaPredicted RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 STX16-NPEPL1H3BU86 382 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 MAGEB3O15480 346 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 TXNL1O43396 289 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 KLF4O43474 513 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 PABPC4LP0CB38 370 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 POLR2EP19388 210 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 MAPKAPK2P49137 400 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 SMARCB1Q12824 385 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 NAA30Q147X3 362 aaPredicted RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 TMEM259Q4ZIN3 620 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 C11orf88Q6PI97 169 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 CLVS1Q8IUQ0 354 aaPredicted RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 HACE1Q8IYU2 909 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 ZNF321PQ8N8H1 164 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 TTC13Q8NBP0 860 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 PPFIBP2Q8ND30 876 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 CHAC2Q8WUX2 184 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 METTL21AQ8WXB1 218 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 FAM149B1Q96BN6 582 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 NTMT1Q9BV86 223 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 ADAM33Q9BZ11 813 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 TFB2MQ9H5Q4 396 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 PARVBQ9HBI1 364 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 ANLNQ9NQW6 1124 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 GMIPQ9P107 970 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 TBC1D14Q9P2M4 693 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 SCAF8Q9UPN6 1271 aaKnown RBP6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 NOX1Q9Y5S8 564 aa6.2□□□□□ -1.42
COL4A3BP-207ENST00000604926 OR6C74A6NCV1 312 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 NOTOA8MTQ0 251 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 AP3D1O14617 1153 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 LCA5LO95447 670 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 ALOX5P09917 674 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 EZRP15311 586 aaKnown RBP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 AMPHP49418 695 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 FOXK2Q01167 660 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 DSG2Q14126 1118 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 SGCAQ16586 387 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 CLVS2Q5SYC1 327 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 GRAMD4Q6IC98 578 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 RFPL4BQ6ZWI9 263 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 VPS37DQ86XT2 251 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 WDR49Q8IV35 697 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 PALM2Q8IXS6 379 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 ZNF654Q8IZM8 581 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 CCAR2Q8N163 923 aaKnown RBP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 C10orf53Q8N6V4 93 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 CCNYL1Q8N7R7 359 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 CEP76Q8TAP6 659 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 ADAMTS18Q8TE60 1221 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 SLC9A6Q92581 669 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 PGBD1Q96JS3 809 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 CCDC42Q96M95 316 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 PITHD1Q9GZP4 211 aaPredicted RBP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 DNAI1Q9UI46 699 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 SNX6Q9UNH7 406 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 PCDHB4Q9Y5E5 795 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 TLR2O60603 784 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 CYP1A1P04798 512 aaPredicted RBP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 SERPINB8P50452 374 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 ASPHQ12797 758 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 PDIA6Q15084 440 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 TBC1D9BQ66K14 1250 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 URGCPQ8TCY9 931 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 OTUD5Q96G74 571 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 ISCA1Q9BUE6 129 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 C9orf16Q9BUW7 83 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 NAA15Q9BXJ9 866 aaKnown RBP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 PAIP1Q9H074 479 aaKnown RBP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 C12orf10Q9HB07 376 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 KLHL11Q9NVR0 708 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 ASNSD1Q9NWL6 643 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 SLC39A1Q9NY26 324 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 IL37Q9NZH6 218 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 SEPT3Q9UH03 358 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 MBD1Q9UIS9 605 aaPredicted RBP6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 CLEC11AQ9Y240 323 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 TSC22D4Q9Y3Q8 395 aa6.19□□□□□ -1.42
COL4A3BP-207ENST00000604926 FHOD1Q9Y613 1164 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms