RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 RAB20Q9NX57 234 aa18.7■□□□□ 0.58
PPFIA3-207ENST00000602716 DNAJC12Q9UKB3 198 aa18.7■□□□□ 0.58
PPFIA3-207ENST00000602716 PADI3Q9ULW8 664 aa18.7■□□□□ 0.58
PPFIA3-207ENST00000602716 RECQL4O94761 1208 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 CD4P01730 458 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 AXLP30530 894 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 PIK3CAP42336 1068 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 JAM2P57087 298 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 TWF2Q6IBS0 349 aaKnown RBP18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 APOBEC3GQ9HC16 384 aaKnown RBP18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 MKI67P46013 3256 aaKnown RBP18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 TATDN2Q93075 761 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 SNX27Q96L92 541 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 KREMEN1Q96MU8 473 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 ZMAT2Q96NC0 199 aaKnown RBP18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 ACAP3Q96P50 834 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 KLK14Q9P0G3 267 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 IPPQ9Y573 584 aa18.69■□□□□ 0.58
PPFIA3-207ENST00000602716 ARHGAP44Q17R89 818 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 GLRA4Q5JXX5 417 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 TRAPPC11Q7Z392 1133 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 HELQQ8TDG4 1101 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 IQCDQ96DY2 449 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 IRX2Q9BZI1 471 aaPredicted RBP18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 TRIM6Q9C030 488 aaPredicted RBP18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 ST7Q9NRC1 585 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 ARHGAP20Q9P2F6 1191 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 SIX4Q9UIU6 781 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 PLAGL2Q9UPG8 496 aa18.68■□□□□ 0.58
PPFIA3-207ENST00000602716 F8VZ95 297 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 IL18RAPO95256 599 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 CST3P01034 146 aaPredicted RBP18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 RPLP2P05387 115 aaKnown RBP18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 COL6A1P12109 1028 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 HNRNPH3P31942 346 aaKnown RBP18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 ARID5AQ03989 594 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 PAK2Q13177 524 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 TRIM60Q495X7 471 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 HGSNATQ68CP4 663 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 ZNF771Q7L3S4 317 aaPredicted RBP18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 EDEM3Q9BZQ6 932 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 UBE2TQ9NPD8 197 aaPredicted RBP18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 LZTFL1Q9NQ48 299 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 FBXL5Q9UKA1 691 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 A0A0U1RQJ8 604 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 TMEM191BP0C7N4 346 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 PLA2G4AP47712 749 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 GJA8P48165 433 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 CETN1Q12798 172 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 NCOA4Q13772 614 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 DRAP1Q14919 205 aaPredicted RBP18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 GPNMBQ14956 572 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 SLC39A5Q6ZMH5 540 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 PPM1KQ8N3J5 372 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 C1orf127Q8N9H9 656 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 CXorf38Q8TB03 319 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 ATRIPQ8WXE1 791 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 RABGGTAQ92696 567 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 SPAG5Q96R06 1193 aa18.67■□□□□ 0.58
PPFIA3-207ENST00000602716 ATP8B1O43520 1251 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 IBSPP21815 317 aaPredicted RBP18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 MYL6P60660 151 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 DSC3Q14574 896 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 PKN2Q16513 984 aaKnown RBP18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 LPPQ93052 612 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 EPC1Q9H2F5 836 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 PCDHB2Q9Y5E7 798 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 KIF5CO60282 957 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 CAND2O75155 1236 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 DUOXA2Q1HG44 320 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 TEX35Q5T0J7 233 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 SFMBT2Q5VUG0 894 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 LRRC8DQ7L1W4 858 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 TMTC1Q8IUR5 882 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 LINC01599Q8WXQ3 324 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 GOLGA1Q92805 767 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 NT5C1BQ96P26 610 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 FAM105AQ9NUU6 356 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 TUBGCP4Q9UGJ1 667 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 NUB1Q9Y5A7 615 aa18.66■□□□□ 0.58
PPFIA3-207ENST00000602716 RALGAPA2Q2PPJ7 1873 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 GPR182O15218 404 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 PHACTR2O75167 634 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 GFPT2O94808 682 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 AFF1P51825 1210 aaKnown RBP18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 FAM193AP78312 1265 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 NOP14P78316 857 aaKnown RBP18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 TMEM132DQ14C87 1099 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 SURF1Q15526 300 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 CYP26C1Q6V0L0 522 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 ACRBPQ8NEB7 543 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 C18orf25Q96B23 403 aaPredicted RBP18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 KIF12Q96FN5 646 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 PARP2Q9UGN5 583 aa18.65■□□□□ 0.58
PPFIA3-207ENST00000602716 NBNO60934 754 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 SEC31AO94979 1220 aaKnown RBP18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 ATF7P17544 494 aaPredicted RBP18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 KYAT1Q16773 422 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 TCTN1Q2MV58 587 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms