RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 H0Y858 1186 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 XYLBO75191 536 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 CFHP08603 1231 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 SRFP11831 508 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 GRIN1Q05586 938 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 MCL1Q07820 350 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 UVSSAQ2YD98 709 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 SLC10A6Q3KNW5 377 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 HAPLN2Q9GZV7 340 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 BLOC1S4Q9NUP1 217 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 WNT16Q9UBV4 365 aa23.74■■□□□ 1.39
UBE2E3-206ENST00000602479 CLDN3O15551 220 aa23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 BMP15O95972 392 aa23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 RPL9P32969 192 aaKnown RBP23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 UBA7P41226 1012 aa23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 VARS2Q5ST30 1063 aaKnown RBP23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 SLC8B1Q6J4K2 584 aa23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 GPBP1Q86WP2 473 aa23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 ATOH1Q92858 354 aaPredicted RBP23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 CALML4Q96GE6 196 aa23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 NUMBLQ9Y6R0 609 aa23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 RIF1Q5UIP0 2472 aaKnown RBP23.73■■□□□ 1.39
UBE2E3-206ENST00000602479 KRBA1A5PL33 1030 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 H0YCG3 227 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 SYN3O14994 580 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 PI15O43692 258 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 CXCL8P10145 99 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 LONP1P36776 959 aaKnown RBP23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 ROR1Q01973 937 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 CUL4AQ13619 759 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 RTL10Q7L3V2 364 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 HAUS6Q7Z4H7 955 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 HCFC1R1Q9NWW0 138 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 TUBGCP4Q9UGJ1 667 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 CDH7Q9ULB5 785 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 POLIQ9UNA4 740 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 COL4A3Q01955 1670 aa23.72■■□□□ 1.39
UBE2E3-206ENST00000602479 SCN1AP35498 2009 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 FANCMQ8IYD8 2048 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 PATJQ8NI35 1801 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 TBC1D4O60343 1298 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 PLCG1P19174 1290 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 ZNF131P52739 623 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 KARSQ15046 597 aaKnown RBP23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 SF3A1Q15459 793 aaKnown RBP23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 ST13P5Q8NFI4 369 aaPredicted RBP23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 ITFG1Q8TB96 612 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 FGF13Q92913 245 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 FGF14Q92915 247 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 SUSD3Q96L08 255 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 NUB1Q9Y5A7 615 aa23.71■■□□□ 1.39
UBE2E3-206ENST00000602479 SPTBN4Q9H254 2564 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 FAM186AA6NE01 2351 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 FRYLO94915 3013 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 WDR27A2RRH5 827 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 MRPL58Q14197 206 aaKnown RBP23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 DHX8Q14562 1220 aaKnown RBP23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 ZNF461Q8TAF7 563 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 GPR152Q8TDT2 470 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 RAD54LQ92698 747 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 BICD1Q96G01 975 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 SLC2A4RGQ9NR83 387 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 DNMT3BQ9UBC3 853 aaKnown RBP23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 CA14Q9ULX7 337 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 ZNF292O60281 2723 aa23.7■■□□□ 1.38
UBE2E3-206ENST00000602479 TTC26A0AVF1 554 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 VPS37CA5D8V6 355 aaPredicted RBP23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 K7ENM7 598 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 HNRNPDLO14979 420 aaKnown RBP23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 FAM189A1O60320 539 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 ABLIM3O94929 683 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 PIGRP01833 764 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 CLTAP09496 248 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 MATR3P43243 847 aaKnown RBP eCLIP23.69■■□□□ 1.384e-7■■■■□ 26.5
UBE2E3-206ENST00000602479 MCM6Q14566 821 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 PABPC1LQ4VXU2 614 aaKnown RBP23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 PARM1Q6UWI2 310 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 CCDC105Q8IYK2 499 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 TMEM130Q8N3G9 435 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 RTP3Q9BQQ7 232 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 PLEKHA5Q9HAU0 1116 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 PARVGQ9HBI0 331 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 TBX20Q9UMR3 447 aa23.69■■□□□ 1.38
UBE2E3-206ENST00000602479 ARHGEF37A1IGU5 675 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 FAM13AO94988 1023 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 SCP2P22307 547 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 MCM4P33991 863 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 TNFSF9P41273 254 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 LIG4P49917 911 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 NPAS3Q8IXF0 933 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 MYCT1Q8N699 235 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 FIZ1Q96SL8 496 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 RPP25Q9BUL9 199 aaKnown RBP23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 FBXL5Q9UKA1 691 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 KCNH3Q9ULD8 1083 aa23.68■■□□□ 1.38
UBE2E3-206ENST00000602479 COL4A2P08572 1712 aa23.67■■□□□ 1.38
UBE2E3-206ENST00000602479 H7C4K7 107 aa23.67■■□□□ 1.38
UBE2E3-206ENST00000602479 ATF2P15336 505 aa23.67■■□□□ 1.38
UBE2E3-206ENST00000602479 SPAG1Q07617 926 aa23.67■■□□□ 1.38
UBE2E3-206ENST00000602479 ZBTB6Q15916 424 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms