RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 CD302Q8IX05 232 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 ZNF507Q8TCN5 953 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 RIN2Q8WYP3 895 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-213ENST00000602088 KIF12Q96FN5 646 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 UHRF1Q96T88 793 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-213ENST00000602088 TUBGCP4Q9UGJ1 667 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 CIZ1Q9ULV3 898 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-213ENST00000602088 FAM50BQ9Y247 325 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 MUC3AQ02505 3323 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 TEX28O15482 410 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 TRAPPC3O43617 180 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 KLRC4O43908 158 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 MYL1P05976 194 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 EPCAMP16422 314 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 CYP3A5P20815 502 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 CLCN4P51793 760 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 RTP2Q5QGT7 225 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 SYCE2Q6PIF2 218 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 PIK3R5Q8WYR1 880 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 S1PR5Q9H228 398 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 ASB7Q9H672 318 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.19■□□□□ 0.5
SSBP4-213ENST00000602088 FNIP2Q9P278 1114 aa18.19■□□□□ 0.5
SSBP4-213ENST00000602088 UBQLN1Q9UMX0 589 aaKnown RBP18.19■□□□□ 0.5
SSBP4-213ENST00000602088 ZNF202O95125 648 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 LDHAP00338 332 aaKnown RBP18.18■□□□□ 0.5
SSBP4-213ENST00000602088 ADH1AP07327 375 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 FGFR3P22607 806 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 BRCC3P46736 316 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 SMAD2Q15796 467 aaKnown RBP18.18■□□□□ 0.5
SSBP4-213ENST00000602088 JADE1Q6IE81 842 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 PRSS55Q6UWB4 352 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-213ENST00000602088 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-213ENST00000602088 KRBA2Q6ZNG9 492 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 CEP57Q86XR8 500 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 ZSWIM2Q8NEG5 633 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 LNX1Q8TBB1 728 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-213ENST00000602088 FAM212AQ96EL1 285 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 NECAB3Q96P71 396 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-213ENST00000602088 CBWD1Q9BRT8 395 aa18.18■□□□□ 0.5
SSBP4-213ENST00000602088 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-213ENST00000602088 XPOTO43592 962 aaKnown RBP18.17■□□□□ 0.5
SSBP4-213ENST00000602088 LRPAP1P30533 357 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 CREMQ03060 361 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 SPATA1Q5VX52 437 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 TMEM130Q8N3G9 435 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 SCFD1Q8WVM8 642 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 SAAL1Q96ER3 474 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 FAM213AQ9BRX8 229 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 PCIF1Q9H4Z3 704 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 SLC39A2Q9NP94 309 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 DZANK1Q9NVP4 752 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 DERAQ9Y315 318 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 VWA8A3KMH1 1905 aa18.17■□□□□ 0.5
SSBP4-213ENST00000602088 ANK1P16157 1881 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 GOLGA6L4A6NEF3 574 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 I3L4J1 428 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 TGFB1I1O43294 461 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 IL18RAPO95256 599 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 C1RP00736 705 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 RPL17P18621 184 aaKnown RBP18.16■□□□□ 0.5
SSBP4-213ENST00000602088 ANP32AP39687 249 aaKnown RBP18.16■□□□□ 0.5
SSBP4-213ENST00000602088 PSMD2Q13200 908 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 TMEM132DQ14C87 1099 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 PSMD5Q16401 504 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 BMT2Q1RMZ1 405 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 ARMCX5Q6P1M9 558 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 PDXDC1Q6P996 788 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 BEST2Q8NFU1 509 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 SUSD6Q92537 303 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 FBXL18Q96ME1 805 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 APOL5Q9BWW9 433 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 EXOC1Q9NV70 894 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 PRKAG3Q9UGI9 489 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 C2CD2Q9Y426 696 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 USP15Q9Y4E8 981 aaPredicted RBP18.16■□□□□ 0.5
SSBP4-213ENST00000602088 NUB1Q9Y5A7 615 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 UBE4BO95155 1302 aa18.16■□□□□ 0.5
SSBP4-213ENST00000602088 KIAA0391O15091 583 aaKnown RBP18.15■□□□□ 0.5
SSBP4-213ENST00000602088 EXTL3O43909 919 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 RPN1P04843 607 aaKnown RBP18.15■□□□□ 0.5
SSBP4-213ENST00000602088 NFICP08651 508 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 TKTP29401 623 aaKnown RBP18.15■□□□□ 0.5
SSBP4-213ENST00000602088 GUCY2FP51841 1108 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 ITIH3Q06033 890 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 STK4Q13043 487 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 KMT5BQ4FZB7 885 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 LILRA6Q6PI73 481 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 FMR1NBQ8N0W7 255 aaPredicted RBP18.15■□□□□ 0.5
SSBP4-213ENST00000602088 GPD1LQ8N335 351 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 CLSTN3Q9BQT9 956 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 ADAM7Q9H2U9 754 aa18.15■□□□□ 0.5
SSBP4-213ENST00000602088 PLXNA3P51805 1871 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 GOLGA8IPA6NC78 632 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 GOLGA8JA6NMD2 632 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 SYN3O14994 580 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 GLUD1P00367 558 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 PRR29P0C7W0 189 aa18.14■□□□□ 0.49
SSBP4-213ENST00000602088 WNT7BP56706 349 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms