RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 XKR4Q5GH76 650 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 ENOSF1Q7L5Y1 443 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 MRPL10Q7Z7H8 261 aaKnown RBP24.32■■□□□ 1.48
IRF3-228ENST00000601291 BEST2Q8NFU1 509 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 APBB2Q92870 758 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 PGBD4Q96DM1 585 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 PPP1R12CQ9BZL4 782 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.32■■□□□ 1.483e-7■■■■■ 53.4
IRF3-228ENST00000601291 TMEM39AQ9NV64 488 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 KLK14Q9P0G3 267 aa24.32■■□□□ 1.48
IRF3-228ENST00000601291 AJAP1Q9UKB5 411 aaPredicted RBP24.32■■□□□ 1.48
IRF3-228ENST00000601291 UMODL1Q5DID0 1318 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 NBNO60934 754 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 KCNE1P15382 129 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 STAT1P42224 750 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 NOP14P78316 857 aaKnown RBP24.31■■□□□ 1.48
IRF3-228ENST00000601291 GCNT1Q02742 428 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 LRRC26Q2I0M4 334 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 ZSCAN30Q86W11 494 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 C1orf127Q8N9H9 656 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 SEPT8Q92599 483 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 RGS18Q9NS28 235 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 DPP3Q9NY33 737 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 TBX21Q9UL17 535 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 UBQLN1Q9UMX0 589 aaKnown RBP24.31■■□□□ 1.48
IRF3-228ENST00000601291 GIT1Q9Y2X7 761 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 TANC1Q9C0D5 1861 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 CITO14578 2027 aa24.31■■□□□ 1.48
IRF3-228ENST00000601291 F8VZ95 297 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 ITGB3P05106 788 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 CDK17Q00537 523 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 DRAP1Q14919 205 aaPredicted RBP24.3■■□□□ 1.48
IRF3-228ENST00000601291 ASIC2Q16515 512 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 ARHGAP44Q17R89 818 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 PLEKHG4Q58EX7 1191 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 HELQQ8TDG4 1101 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 TAF4BQ92750 862 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 RPS6KC1Q96S38 1066 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 UBN1Q9NPG3 1134 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 AIPL1Q9NZN9 384 aa24.3■■□□□ 1.48
IRF3-228ENST00000601291 SMIM28A0A1B0GU29 152 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 ASS1P00966 412 aaKnown RBP24.29■■□□□ 1.48
IRF3-228ENST00000601291 CST3P01034 146 aaPredicted RBP24.29■■□□□ 1.48
IRF3-228ENST00000601291 MYL6P60660 151 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 ZNF699Q32M78 642 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 GLRA4Q5JXX5 417 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 WDR59Q6PJI9 974 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 SLC24A5Q71RS6 500 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 ZMAT2Q96NC0 199 aaKnown RBP24.29■■□□□ 1.48
IRF3-228ENST00000601291 RBAK-RBAKDNI3L0D1 243 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 CCDC172P0C7W6 258 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 TBXAS1P24557 533 aaPredicted RBP24.29■■□□□ 1.48
IRF3-228ENST00000601291 MSNP26038 577 aaKnown RBP24.29■■□□□ 1.48
IRF3-228ENST00000601291 ATICP31939 592 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 SOX5P35711 763 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 CCL23P55773 120 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 RBP5P82980 135 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 ZBTB6Q15916 424 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 RNF169Q8NCN4 708 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 TATDN2Q93075 761 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 WNT8AQ9H1J5 351 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 SIX4Q9UIU6 781 aa24.29■■□□□ 1.48
IRF3-228ENST00000601291 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.29■■□□□ 1.48
IRF3-228ENST00000601291 DNAH12Q6ZR08 3092 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 SERPING1P05155 500 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 FERP16591 822 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 CYP2C18P33260 490 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 MLH1P40692 756 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 GPNMBQ14956 572 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 E4F1Q66K89 784 aaPredicted RBP24.28■■□□□ 1.48
IRF3-228ENST00000601291 SPOPLQ6IQ16 392 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 ECHDC2Q86YB7 292 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 DBF4BQ8NFT6 615 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 LPPQ93052 612 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 SCLYQ96I15 445 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 CXCL16Q9H2A7 254 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 TSPYL2Q9H2G4 693 aaPredicted RBP24.28■■□□□ 1.48
IRF3-228ENST00000601291 RSAD1Q9HA92 442 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 PYCARDQ9ULZ3 195 aa24.28■■□□□ 1.48
IRF3-228ENST00000601291 SOWAHDA6NJG2 315 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 CYP3A5P20815 502 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 POLR2BP30876 1174 aaKnown RBP24.27■■□□□ 1.48
IRF3-228ENST00000601291 KCNJ6P48051 423 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 TDRD12Q587J7 1177 aaKnown RBP24.27■■□□□ 1.48
IRF3-228ENST00000601291 AGMOQ6ZNB7 445 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 KREMEN1Q96MU8 473 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 GPR88Q9GZN0 384 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 APOBEC3GQ9HC16 384 aaKnown RBP24.27■■□□□ 1.48
IRF3-228ENST00000601291 SLC38A7Q9NVC3 462 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 TUBGCP4Q9UGJ1 667 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 AGAP1Q9UPQ3 857 aa24.27■■□□□ 1.48
IRF3-228ENST00000601291 C9IYK1 514 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 EOMESO95936 686 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 CXCL10P02778 98 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 ATF7P17544 494 aaPredicted RBP24.26■■□□□ 1.47
IRF3-228ENST00000601291 IBSPP21815 317 aaPredicted RBP24.26■■□□□ 1.47
IRF3-228ENST00000601291 ARID5AQ03989 594 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 KLHL30Q0D2K2 578 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 CUL2Q13617 745 aa24.26■■□□□ 1.47
IRF3-228ENST00000601291 CXorf38Q8TB03 319 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms