RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ITFG1Q8TB96 612 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 CDK5RAP3Q96JB5 506 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 ARHGEF3Q9NR81 526 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 HCFC1R1Q9NWW0 138 aa18.58■□□□□ 0.56
SCAF1-204ENST00000601038 MEFVO15553 781 aaPredicted RBP18.57■□□□□ 0.56
SCAF1-204ENST00000601038 SLC26A4O43511 780 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 TBC1D4O60343 1298 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 ABLIM3O94929 683 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 CD2BP2O95400 341 aaKnown RBP18.57■□□□□ 0.56
SCAF1-204ENST00000601038 HARSP12081 509 aaKnown RBP18.57■□□□□ 0.56
SCAF1-204ENST00000601038 MCM2P49736 904 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 GPC5P78333 572 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 ROR1Q01973 937 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 MRPL58Q14197 206 aaKnown RBP18.57■□□□□ 0.56
SCAF1-204ENST00000601038 SLC10A6Q3KNW5 377 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 TMEM119Q4V9L6 283 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 ASCL5Q7RTU5 278 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 C18orf25Q96B23 403 aaPredicted RBP18.57■□□□□ 0.56
SCAF1-204ENST00000601038 AK8Q96MA6 479 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 LARSQ9P2J5 1176 aaKnown RBP18.57■□□□□ 0.56
SCAF1-204ENST00000601038 ANKFY1Q9P2R3 1169 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 NUB1Q9Y5A7 615 aa18.57■□□□□ 0.56
SCAF1-204ENST00000601038 NOTCH4Q99466 2003 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 MYH11P35749 1972 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 ARHGEF37A1IGU5 675 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 PRR23AA6NEV1 266 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 H0YCG3 227 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 H7C4K7 107 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 CLDN3O15551 220 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 ATF2P15336 505 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 ELF1P32519 619 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 MCL1Q07820 350 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 FRMD5Q7Z6J6 570 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 KCNN1Q92952 543 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 NKD2Q969F2 451 aaPredicted RBP18.56■□□□□ 0.56
SCAF1-204ENST00000601038 SUSD3Q96L08 255 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 PLEKHA5Q9HAU0 1116 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 UPF2Q9HAU5 1272 aaKnown RBP18.56■□□□□ 0.56
SCAF1-204ENST00000601038 AVENQ9NQS1 362 aaPredicted RBP18.56■□□□□ 0.56
SCAF1-204ENST00000601038 SIT1Q9Y3P8 196 aa18.56■□□□□ 0.56
SCAF1-204ENST00000601038 PTPRZ1P23471 2315 aaPredicted RBP18.55■□□□□ 0.56
SCAF1-204ENST00000601038 WDR27A2RRH5 827 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 RHOP08100 348 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 STARD6P59095 220 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 SEZ6Q53EL9 994 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 ARSHQ5FYA8 562 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 NPAS3Q8IXF0 933 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 TCEAL8Q8IYN2 117 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 SHDQ96IW2 340 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 ODF2LQ9ULJ1 636 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 SMC3Q9UQE7 1217 aa18.55■□□□□ 0.56
SCAF1-204ENST00000601038 MRPS23Q9Y3D9 190 aaKnown RBP18.55■□□□□ 0.56
SCAF1-204ENST00000601038 NPHP3-ACAD11A0A0J9YXS1 232 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 PRRG1O14668 218 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 LRG1P02750 347 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 CLTAP09496 248 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 PTPN2P17706 415 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 MCM4P33991 863 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 NCKAP1LP55160 1127 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 CACNB1Q02641 598 aaPredicted RBP18.54■□□□□ 0.56
SCAF1-204ENST00000601038 CTXN3Q4LDR2 81 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 LARP1BQ659C4 914 aaKnown RBP18.54■□□□□ 0.56
SCAF1-204ENST00000601038 TPGS2Q68CL5 300 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 HAUS6Q7Z4H7 955 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 APPL2Q8NEU8 664 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 CALML4Q96GE6 196 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 GDE1Q9NZC3 331 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 DLGAP2Q9P1A6 1054 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 FBXL5Q9UKA1 691 aa18.54■□□□□ 0.56
SCAF1-204ENST00000601038 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.54■□□□□ 0.56
SCAF1-204ENST00000601038 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.54■□□□□ 0.56
SCAF1-204ENST00000601038 ZFHX2Q9C0A1 2572 aaPredicted RBP18.53■□□□□ 0.56
SCAF1-204ENST00000601038 MYH15Q9Y2K3 1946 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 TTC26A0AVF1 554 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 BMP15O95972 392 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 DCNP07585 359 aaKnown RBP18.53■□□□□ 0.56
SCAF1-204ENST00000601038 CXCL8P10145 99 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 SCP2P22307 547 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 UBA7P41226 1012 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 MATR3P43243 847 aaKnown RBP eCLIP18.53■□□□□ 0.56
SCAF1-204ENST00000601038 ARPP19P56211 112 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 SLC5A9Q2M3M2 681 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 ING5Q8WYH8 240 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 DDX12PQ92771 950 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 BICD1Q96G01 975 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 TBC1D32Q96NH3 1257 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 HAPLN2Q9GZV7 340 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 CYP4F11Q9HBI6 524 aa18.53■□□□□ 0.56
SCAF1-204ENST00000601038 SEC24AO95486 1093 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 LRPAP1P30533 357 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 PFKPQ01813 784 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 SNW1Q13573 536 aaKnown RBP18.52■□□□□ 0.56
SCAF1-204ENST00000601038 ZBTB6Q15916 424 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 KYAT1Q16773 422 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 SLC44A4Q53GD3 710 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 SPECC1Q5M775 1068 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 ZNF280DQ6N043 979 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 GPBP1Q86WP2 473 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 PJA1Q8NG27 643 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 MCRS1Q96EZ8 462 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms