RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 DERAQ9Y315 318 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 C2CD2Q9Y426 696 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 MYO10Q9HD67 2058 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 SF3B1O75533 1304 aaKnown RBP eCLIP9.57□□□□□ -0.88
SSBP4-208ENST00000600628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.57□□□□□ -0.88
SSBP4-208ENST00000600628 A0A1B0GVL5 298 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 M0QZQ0 153 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 PIRO00625 290 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 NR1I2O75469 434 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 SRGAP2BP0DMP2 458 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 EPCAMP16422 314 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 CASP1P29466 404 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 NDUFA8P51970 172 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 YARSP54577 528 aaKnown RBP9.57□□□□□ -0.88
SSBP4-208ENST00000600628 WNT7BP56706 349 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 OSTNP61366 133 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 ELAVL2Q12926 359 aaKnown RBP9.57□□□□□ -0.88
SSBP4-208ENST00000600628 SNW1Q13573 536 aaKnown RBP9.57□□□□□ -0.88
SSBP4-208ENST00000600628 POSTNQ15063 836 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 FAM26FQ5R3K3 315 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 SPATA1Q5VX52 437 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.57□□□□□ -0.88
SSBP4-208ENST00000600628 PPFIBP1Q86W92 1011 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 ADHFE1Q8IWW8 467 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 C12orf56Q8IXR9 622 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 CCDC65Q8IXS2 484 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 TMEM130Q8N3G9 435 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 CMASQ8NFW8 434 aaPredicted RBP9.57□□□□□ -0.88
SSBP4-208ENST00000600628 SPATA20Q8TB22 786 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 FEZF2Q8TBJ5 459 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 SCFD1Q8WVM8 642 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 CASP10Q92851 521 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 HPS3Q969F9 1004 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 SUSD3Q96L08 255 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 ACCSQ96QU6 501 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 TCHPQ9BT92 498 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 TTPALQ9BTX7 342 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 MSTO1Q9BUK6 570 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 GZF1Q9H116 711 aaPredicted RBP9.57□□□□□ -0.88
SSBP4-208ENST00000600628 ASB7Q9H672 318 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 SERTAD1Q9UHV2 236 aa9.57□□□□□ -0.88
SSBP4-208ENST00000600628 UBE4BO95155 1302 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 LOC730098B7Z3J9 87 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 PODXLO00592 558 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 KIAA0391O15091 583 aaKnown RBP9.56□□□□□ -0.88
SSBP4-208ENST00000600628 GCNT3O95395 438 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 URODP06132 367 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 IDEP14735 1019 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 SSTR3P32745 418 aaPredicted RBP9.56□□□□□ -0.88
SSBP4-208ENST00000600628 ACOT2P49753 483 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 SNRPFP62306 86 aaKnown RBP9.56□□□□□ -0.88
SSBP4-208ENST00000600628 ITIH3Q06033 890 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 DPYDQ12882 1025 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 LLGL2Q6P1M3 1020 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 RSPO2Q6UXX9 243 aaPredicted RBP9.56□□□□□ -0.88
SSBP4-208ENST00000600628 NT5DC4Q86YG4 428 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 BRSK2Q8IWQ3 736 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 EFCAB13Q8IY85 973 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 GRAMD1CQ8IYS0 662 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 FMR1NBQ8N0W7 255 aaPredicted RBP9.56□□□□□ -0.88
SSBP4-208ENST00000600628 TMEM87AQ8NBN3 555 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 BICD1Q96G01 975 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 BORCS6Q96GS4 357 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 B3GALT6Q96L58 329 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 CBWD1Q9BRT8 395 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 ADAM7Q9H2U9 754 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 ZHX3Q9H4I2 956 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 TMEM206Q9H813 350 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 DZANK1Q9NVP4 752 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 DMAC2Q9NW81 257 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 TBC1D7Q9P0N9 293 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 MTRRQ9UBK8 725 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 TUBGCP4Q9UGJ1 667 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 UBQLN1Q9UMX0 589 aaKnown RBP9.56□□□□□ -0.88
SSBP4-208ENST00000600628 USP15Q9Y4E8 981 aaPredicted RBP9.56□□□□□ -0.88
SSBP4-208ENST00000600628 BACE2Q9Y5Z0 518 aa9.56□□□□□ -0.88
SSBP4-208ENST00000600628 PI4K2BG5E9Z4 385 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 SYN3O14994 580 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 ADAM12O43184 909 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 TGM5O43548 720 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 TADA2AO75478 443 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 B3GAT3O94766 335 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 PRPF6O94906 941 aaKnown RBP9.55□□□□□ -0.88
SSBP4-208ENST00000600628 ABLIM3O94929 683 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 RHOBTB3O94955 611 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 ADH1AP07327 375 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 NFICP08651 508 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 POU2F2P09086 479 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 PAX3P23760 479 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 CA8P35219 290 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 SYKP43405 635 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 ASIC1P78348 528 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 CREMQ03060 361 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 STK4Q13043 487 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 PSMD2Q13200 908 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 RAB33AQ14088 237 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 FAM171A1Q5VUB5 890 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 JADE1Q6IE81 842 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 SLC8B1Q6J4K2 584 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms