RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 CAP1Q01518 475 aa21.54■■□□□ 1.04
PNKP-214ENST00000600573 SNX17Q15036 470 aa21.54■■□□□ 1.04
PNKP-214ENST00000600573 KCNA10Q16322 511 aa21.54■■□□□ 1.04
PNKP-214ENST00000600573 IFI16Q16666 785 aaKnown RBP21.54■■□□□ 1.04
PNKP-214ENST00000600573 LMBRD2Q68DH5 695 aaPredicted RBP21.54■■□□□ 1.04
PNKP-214ENST00000600573 TATDN2Q93075 761 aa21.54■■□□□ 1.04
PNKP-214ENST00000600573 CALR3Q96L12 384 aaKnown RBP21.54■■□□□ 1.04
PNKP-214ENST00000600573 OSMRQ99650 979 aa21.54■■□□□ 1.04
PNKP-214ENST00000600573 TSEN34Q9BSV6 310 aaKnown RBP21.54■■□□□ 1.04
PNKP-214ENST00000600573 CELF4Q9BZC1 486 aaKnown RBP21.54■■□□□ 1.04
PNKP-214ENST00000600573 C2CD2Q9Y426 696 aa21.54■■□□□ 1.04
PNKP-214ENST00000600573 SAR1BQ9Y6B6 198 aa21.54■■□□□ 1.04
PNKP-214ENST00000600573 THSD7BQ9C0I4 1608 aa21.53■■□□□ 1.04
PNKP-214ENST00000600573 MROH7Q68CQ1 1323 aa21.53■■□□□ 1.04
PNKP-214ENST00000600573 CSDE1O75534 798 aaKnown RBP21.53■■□□□ 1.04
PNKP-214ENST00000600573 ASS1P00966 412 aaKnown RBP21.53■■□□□ 1.04
PNKP-214ENST00000600573 HOXA11P31270 313 aaPredicted RBP21.53■■□□□ 1.04
PNKP-214ENST00000600573 TUBB4BP68371 445 aa21.53■■□□□ 1.04
PNKP-214ENST00000600573 CKAP4Q07065 602 aaKnown RBP21.53■■□□□ 1.04
PNKP-214ENST00000600573 ZNF677Q86XU0 584 aa21.53■■□□□ 1.04
PNKP-214ENST00000600573 GINS2Q9Y248 185 aa21.53■■□□□ 1.04
PNKP-214ENST00000600573 MOXD2PA6NHM9 499 aa21.52■■□□□ 1.04
PNKP-214ENST00000600573 DDX3XO00571 662 aaKnown RBP eCLIP21.52■■□□□ 1.04
PNKP-214ENST00000600573 ENC1O14682 589 aa21.52■■□□□ 1.04
PNKP-214ENST00000600573 H2AFZP0C0S5 128 aa21.52■■□□□ 1.04
PNKP-214ENST00000600573 USP8P40818 1118 aa21.52■■□□□ 1.04
PNKP-214ENST00000600573 TFAMQ00059 246 aaKnown RBP21.52■■□□□ 1.04
PNKP-214ENST00000600573 TMEM62Q0P6H9 643 aa21.52■■□□□ 1.04
PNKP-214ENST00000600573 CUL2Q13617 745 aa21.52■■□□□ 1.04
PNKP-214ENST00000600573 TEX35Q5T0J7 233 aa21.52■■□□□ 1.04
PNKP-214ENST00000600573 H2AFVQ71UI9 128 aa21.52■■□□□ 1.04
PNKP-214ENST00000600573 RSRC2Q7L4I2 434 aaKnown RBP21.52■■□□□ 1.04
PNKP-214ENST00000600573 LACTBL1A8MY62 500 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 CXCL8P10145 99 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 GZMAP12544 262 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 ATICP31939 592 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 OSTNP61366 133 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 YWHAEP62258 255 aaKnown RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 NOP14P78316 857 aaKnown RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 MRPS6P82932 125 aaKnown RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 ZNF200P98182 395 aaPredicted RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 SERINC5Q86VE9 423 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 CDR2LQ86X02 465 aaPredicted RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 PDCL2Q8N4E4 241 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 LNX1Q8TBB1 728 aaPredicted RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 U2AF1L4Q8WU68 220 aaKnown RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 RABGGTAQ92696 567 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 PI4K2AQ9BTU6 479 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 PACSIN1Q9BY11 444 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 MTMR12Q9C0I1 747 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 FAM124BQ9H5Z6 455 aaPredicted RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 CDHR5Q9HBB8 845 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 TSKSQ9UJT2 592 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 CNTN6Q9UQ52 1028 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 TRPV2Q9Y5S1 764 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 A0A0A6YYK5 440 aaPredicted RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 CTAGE15A4D2H0 777 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 CTAGE8P0CG41 777 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 PDE6CP51160 858 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 YARSP54577 528 aaKnown RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 NAP1L1P55209 391 aaKnown RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 SLC10A6Q3KNW5 377 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 CTAGE6Q86UF2 777 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 CTAGE4Q8IX94 777 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 CEP120Q8N960 986 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 OLIG1Q8TAK6 271 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 KAT5Q92993 513 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 SEZ6LQ9BYH1 1024 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 HMX1Q9NP08 348 aaPredicted RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 PUF60Q9UHX1 559 aaKnown RBP21.51■■□□□ 1.03
PNKP-214ENST00000600573 SALL4Q9UJQ4 1053 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 PCDHB2Q9Y5E7 798 aa21.51■■□□□ 1.03
PNKP-214ENST00000600573 CYP26A1O43174 497 aa21.5■■□□□ 1.03
PNKP-214ENST00000600573 ZNF296Q8WUU4 475 aaPredicted RBP21.5■■□□□ 1.03
PNKP-214ENST00000600573 SNX12Q9UMY4 172 aa21.5■■□□□ 1.03
PNKP-214ENST00000600573 HYOU1Q9Y4L1 999 aa21.5■■□□□ 1.03
PNKP-214ENST00000600573 SCN10AQ9Y5Y9 1956 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 BUB1O43683 1085 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 CST3P01034 146 aaPredicted RBP21.49■■□□□ 1.03
PNKP-214ENST00000600573 CYP11B1P15538 503 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 CDR2Q01850 454 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 TMEM132DQ14C87 1099 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 GDF6Q6KF10 455 aaPredicted RBP21.49■■□□□ 1.03
PNKP-214ENST00000600573 PPP1R2P3Q6NXS1 205 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 GLYCTKQ8IVS8 523 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 EFCAB13Q8IY85 973 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 EPS8L1Q8TE68 723 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 UBE2Q2Q8WVN8 375 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 TRIM6Q9C030 488 aaPredicted RBP21.49■■□□□ 1.03
PNKP-214ENST00000600573 NIF3L1Q9GZT8 377 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 VRTNQ9H8Y1 702 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 APOBEC3GQ9HC16 384 aaKnown RBP21.49■■□□□ 1.03
PNKP-214ENST00000600573 CHST12Q9NRB3 414 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 ITGA11Q9UKX5 1188 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 PCDHGC5Q9Y5F6 944 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 NCANO14594 1321 aa21.49■■□□□ 1.03
PNKP-214ENST00000600573 NPTXRO95502 500 aa21.48■■□□□ 1.03
PNKP-214ENST00000600573 STAU1O95793 577 aaKnown RBP21.48■■□□□ 1.03
PNKP-214ENST00000600573 TMEM253P0C7T8 217 aa21.48■■□□□ 1.03
PNKP-214ENST00000600573 KRT5P13647 590 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms