RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PKN3Q6P5Z2 889 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 PDZD4Q76G19 769 aaPredicted RBP19.54■□□□□ 0.72
SSBP4-207ENST00000600244 PROSER1Q86XN7 944 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 ZSCAN18Q8TBC5 510 aaPredicted RBP19.54■□□□□ 0.72
SSBP4-207ENST00000600244 BCLAF3A2AJT9 711 aaKnown RBP19.53■□□□□ 0.72
SSBP4-207ENST00000600244 INO80B-WBP1J3KQ70 363 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 CDX4O14627 284 aaPredicted RBP19.53■□□□□ 0.72
SSBP4-207ENST00000600244 NPTXRO95502 500 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 GNA11P29992 359 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 FCHO2Q0JRZ9 810 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 Q4G0T1 1027 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 KIAA1211LQ6NV74 962 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 SLC27A1Q6PCB7 646 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 C19orf48Q6RUI8 117 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 CDR2LQ86X02 465 aaPredicted RBP19.53■□□□□ 0.72
SSBP4-207ENST00000600244 E2F7Q96AV8 911 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 ANKFY1Q9P2R3 1169 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 WRAP73Q9P2S5 460 aaPredicted RBP19.53■□□□□ 0.72
SSBP4-207ENST00000600244 KLK13Q9UKR3 277 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 EML5Q05BV3 1969 aa19.53■□□□□ 0.72
SSBP4-207ENST00000600244 A0A1B0GUA9 196 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 B4GALT5O43286 388 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 ZBTB43O43298 467 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 QARSP47897 775 aaKnown RBP19.52■□□□□ 0.72
SSBP4-207ENST00000600244 ROR1Q01973 937 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 PON2Q15165 354 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 CYP4A22Q5TCH4 519 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 SLC8B1Q6J4K2 584 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 CD300LGQ6UXG3 332 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 TCEAL8Q8IYN2 117 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 HS6ST3Q8IZP7 471 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 CCDC12Q8WUD4 166 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-207ENST00000600244 DDX27Q96GQ7 796 aaKnown RBP19.52■□□□□ 0.72
SSBP4-207ENST00000600244 BBC3Q96PG8 261 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-207ENST00000600244 ESYT1Q9BSJ8 1104 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 CXCL16Q9H2A7 254 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 BMP2KQ9NSY1 1161 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-207ENST00000600244 PCNX2A6NKB5 2137 aa19.52■□□□□ 0.72
SSBP4-207ENST00000600244 FAM221BA6H8Z2 402 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 TMEM189-UBE2V1I3L0A0 370 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 EML1O00423 815 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 SEC24AO95486 1093 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 THP07101 528 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 ELF1P32519 619 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 EPHA5P54756 1037 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 CREB5Q02930 508 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 MXD4Q14582 209 aaPredicted RBP19.51■□□□□ 0.71
SSBP4-207ENST00000600244 EMC2Q15006 297 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 ANKS3Q6ZW76 656 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 ETNPPLQ8TBG4 499 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 TMEM9BQ9NQ34 198 aa19.51■□□□□ 0.71
SSBP4-207ENST00000600244 FREM2Q5SZK8 3169 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 CYP3A7-CYP3A51PA0A087WV96 503 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 PRRG1O14668 218 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 SLC27A2O14975 620 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 ATF2P15336 505 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 GJA1P17302 382 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 CYP3A7P24462 503 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 TKTP29401 623 aaKnown RBP19.5■□□□□ 0.71
SSBP4-207ENST00000600244 YAF2Q8IY57 180 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 DEFB124Q8NES8 71 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 XPNPEP1Q9NQW7 623 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 SNTG2Q9NY99 539 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 INSL5Q9Y5Q6 135 aa19.5■□□□□ 0.71
SSBP4-207ENST00000600244 ASCC3Q8N3C0 2202 aaKnown RBP19.49■□□□□ 0.71
SSBP4-207ENST00000600244 DKC1O60832 514 aaKnown RBP eCLIP19.49■□□□□ 0.71
SSBP4-207ENST00000600244 RHOBTB1O94844 696 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 ADD1P35611 737 aaKnown RBP19.49■□□□□ 0.71
SSBP4-207ENST00000600244 CAMKK1Q8N5S9 505 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 BICD2Q8TD16 824 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 LRRC3BQ96PB8 259 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 NFKBIZQ9BYH8 718 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 GPR88Q9GZN0 384 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 CYP4F11Q9HBI6 524 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 GTSE1Q9NYZ3 720 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 CEP72Q9P209 647 aa19.49■□□□□ 0.71
SSBP4-207ENST00000600244 CACNA1EQ15878 2313 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 GOLGA8AA7E2F4 631 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 GOLGA8BA8MQT2 603 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 TDP2O95551 362 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 FGD1P98174 961 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 TFDP1Q14186 410 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 TEAD2Q15562 447 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 ELF2Q15723 593 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 COL28A1Q2UY09 1125 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 C4orf19Q8IY42 314 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 LEMD2Q8NC56 503 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 TTC8Q8TAM2 541 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 FAM200AQ8TCP9 573 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 MTRQ99707 1265 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 SLC8A2Q9UPR5 921 aa19.48■□□□□ 0.71
SSBP4-207ENST00000600244 KHNYNO15037 678 aaKnown RBP19.47■□□□□ 0.71
SSBP4-207ENST00000600244 B3GAT3O94766 335 aa19.47■□□□□ 0.71
SSBP4-207ENST00000600244 P4HBP07237 508 aaKnown RBP19.47■□□□□ 0.71
SSBP4-207ENST00000600244 MYL4P12829 197 aa19.47■□□□□ 0.71
SSBP4-207ENST00000600244 CAPSQ13938 189 aa19.47■□□□□ 0.71
SSBP4-207ENST00000600244 IQCEQ6IPM2 695 aa19.47■□□□□ 0.71
SSBP4-207ENST00000600244 SHKBP1Q8TBC3 707 aa19.47■□□□□ 0.71
SSBP4-207ENST00000600244 ASAP3Q8TDY4 903 aa19.47■□□□□ 0.71
SSBP4-207ENST00000600244 TBCKQ8TEA7 893 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms