RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 DYRK4Q9NR20 520 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 MINPP1Q9UNW1 487 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 CHMP2BQ9UQN3 213 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 FAM32AQ9Y421 112 aaKnown RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 SUPT3HB4E1H0 165 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 HSD17B4P51659 736 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 PLOD1Q02809 727 aaPredicted RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 PCSK7Q16549 785 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 C16orf89Q6UX73 402 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 SCFD1Q8WVM8 642 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 KCNF1Q9H3M0 494 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 PSMC3IPQ9P2W1 217 aaPredicted RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 CAB39Q9Y376 341 aaPredicted RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 NEU2Q9Y3R4 380 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 SPATA31E1Q6ZUB1 1445 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 ATP2C1P98194 919 aaPredicted RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 TRIP10Q15642 601 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 TEX9Q8N6V9 391 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 PTPRN2Q92932 1015 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 CDYLQ9Y232 598 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 C3orf70A6NLC5 250 aaPredicted RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 ZNF263O14978 683 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 YWHABP31946 246 aaKnown RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 KLC1Q07866 573 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 PTK7Q13308 1070 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 LAYNQ6UX15 382 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 DDX53Q86TM3 631 aaKnown RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 AGGF1Q8N302 714 aaeCLIP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 TTLL6Q8N841 843 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 ZNF556Q9HAH1 456 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 SELENONQ9NZV5 590 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 C16orf96A6NNT2 1141 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 ZBTB22O15209 634 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 MYL2P10916 166 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 GRIN1Q05586 938 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 RAD51Q06609 339 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 RNF149Q8NC42 400 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 MMP10P09238 476 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 CPA2P48052 419 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 ZNF200P98182 395 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 FMR1Q06787 632 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 WDR72Q3MJ13 1102 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 XPO6Q96QU8 1125 aaKnown RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 MROH7-TTC4A0A0A0MT08 1334 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 F5H6K3 240 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 ACOT2P49753 483 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 GALCP54803 685 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 KLRC3Q07444 240 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 TRADDQ15628 312 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SYDE1Q6ZW31 735 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SLC25A41Q8N5S1 370 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 C18orf8Q96DM3 657 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SMAD5Q99717 465 aaKnown RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 RBM12Q9NTZ6 932 aaKnown RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 TBC1D23Q9NUY8 699 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SPP2Q13103 211 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 LRIG3Q6UXM1 1119 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SNX31Q8N9S9 440 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SYTL2Q9HCH5 934 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 CD274Q9NZQ7 290 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SYNMO15061 1565 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 GRAP2O75791 330 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 PRKCBP05771 671 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 PRPF39Q86UA1 669 aaKnown RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SPATA2LQ8IUW3 424 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 ZNF513Q8N8E2 541 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 SENP7Q9BQF6 1050 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 CD209Q9NNX6 404 aa12.42□□□□□ -0.42
SCN8A-208ENST00000599343 FBXO2Q9UK22 296 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-208ENST00000599343 ZNF521Q96K83 1311 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 PALLDQ8WX93 1383 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 B2RBV5 119 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 HIST1H2AGP0C0S8 130 aaPredicted RBP12.41□□□□□ -0.42
SCN8A-208ENST00000599343 HIST1H2ADP20671 130 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 SERPINB3P29508 390 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 AKT1P31749 480 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 SGO1Q5FBB7 561 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 HORMAD1Q86X24 394 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ATPAF2Q8N5M1 289 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 HIST1H2AHQ96KK5 128 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 HIST1H2AJQ99878 128 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 H2AFJQ9BTM1 129 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 AGPAT5Q9NUQ2 364 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 AGAP1Q9UPQ3 857 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 PKP3Q9Y446 797 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 METP08581 1390 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ARAP3Q8WWN8 1544 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 FAM47DPA6NHR8 397 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 CDH2P19022 906 aaPredicted RBP12.41□□□□□ -0.42
SCN8A-208ENST00000599343 PLA2G4AP47712 749 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ZNF560Q96MR9 790 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 CCT7Q99832 543 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 APEX2Q9UBZ4 518 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 WDR19Q8NEZ3 1342 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 POLRMTO00411 1230 aaKnown RBP12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ATMINO43313 823 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms