RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ABCD1P33897 745 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 UVSSAQ2YD98 709 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 ZBTB41Q5SVQ8 909 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 SLC39A4Q6P5W5 647 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 CCDC73Q6ZRK6 1079 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 FBXL6Q8N531 539 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 LINC00301Q8NCQ3 95 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 DDX12PQ92771 950 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 STAMQ92783 540 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 SMOC2Q9H3U7 446 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 ST6GALNAC4Q9H4F1 302 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 NUB1Q9Y5A7 615 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 CDY1Q9Y6F8 540 aa16.43■□□□□ 0.22
LIG1-215ENST00000597901 TDRD15B5MCY1 1934 aaKnown RBP16.43■□□□□ 0.22
LIG1-215ENST00000597901 SYN3O14994 580 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 FAM189A1O60320 539 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 ADRB2P07550 413 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 HNRNPA1P09651 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
LIG1-215ENST00000597901 GBP2P32456 591 aaPredicted RBP16.42■□□□□ 0.22
LIG1-215ENST00000597901 MRPL58Q14197 206 aaKnown RBP16.42■□□□□ 0.22
LIG1-215ENST00000597901 STK38Q15208 465 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 PPM1LQ5SGD2 360 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 VARS2Q5ST30 1063 aaKnown RBP16.42■□□□□ 0.22
LIG1-215ENST00000597901 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
LIG1-215ENST00000597901 LIN9Q5TKA1 542 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 MAP4K3Q8IVH8 894 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 DNAJC19Q96DA6 116 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 ZNF396Q96N95 335 aaPredicted RBP16.42■□□□□ 0.22
LIG1-215ENST00000597901 MYADMQ96S97 322 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 PRRX2Q99811 253 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 MSTO1Q9BUK6 570 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 RPF1Q9H9Y2 349 aaKnown RBP16.42■□□□□ 0.22
LIG1-215ENST00000597901 KCNK12Q9HB15 430 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 TUBGCP4Q9UGJ1 667 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 CLUHO75153 1309 aa16.42■□□□□ 0.22
LIG1-215ENST00000597901 A0A087X0B3 334 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 TBC1D4O60343 1298 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 C8AP07357 584 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
LIG1-215ENST00000597901 CYP3A5P20815 502 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 TDGQ13569 410 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 ENOX2Q16206 610 aaKnown RBP16.41■□□□□ 0.22
LIG1-215ENST00000597901 FOXD4L5Q5VV16 416 aaPredicted RBP16.41■□□□□ 0.22
LIG1-215ENST00000597901 RTL10Q7L3V2 364 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 GRASPQ7Z6J2 395 aaPredicted RBP16.41■□□□□ 0.22
LIG1-215ENST00000597901 SFR1Q86XK3 245 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 TMEM130Q8N3G9 435 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 FOXD4L4Q8WXT5 416 aaPredicted RBP16.41■□□□□ 0.22
LIG1-215ENST00000597901 KIF12Q96FN5 646 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 SUSD3Q96L08 255 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 TSPAN18Q96SJ8 248 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 STRA6Q9BX79 667 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.41■□□□□ 0.22
LIG1-215ENST00000597901 IGSF9Q9P2J2 1179 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 CPSF3Q9UKF6 684 aaKnown RBP16.41■□□□□ 0.22
LIG1-215ENST00000597901 UBQLN1Q9UMX0 589 aaKnown RBP16.41■□□□□ 0.22
LIG1-215ENST00000597901 STYXL1Q9Y6J8 313 aa16.41■□□□□ 0.22
LIG1-215ENST00000597901 H7C4K7 107 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 SPTLC2O15270 562 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 CCL16O15467 120 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 PPP6R2O75170 966 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 ABLIM3O94929 683 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 LAMP2P13473 410 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 GAP43P17677 238 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 LRPAP1P30533 357 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 HOXA9P31269 272 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 MCM4P33991 863 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 STAT6P42226 847 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 PPP2R3AQ06190 1150 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 SLFN12LQ6IEE8 588 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 SLC8B1Q6J4K2 584 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 ZNF461Q8TAF7 563 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 SLC7A14Q8TBB6 771 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 FAM212AQ96EL1 285 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 MRPL44Q9H9J2 332 aaKnown RBP16.4■□□□□ 0.22
LIG1-215ENST00000597901 EPS15L1Q9UBC2 864 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 SEL1LQ9UBV2 794 aa16.4■□□□□ 0.22
LIG1-215ENST00000597901 TECTAO75443 2155 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 TISP43B9A030 160 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 PPP1R37O75864 691 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 PDGFBP01127 241 aaPredicted RBP16.39■□□□□ 0.21
LIG1-215ENST00000597901 HSP90AA1P07900 732 aaKnown RBP16.39■□□□□ 0.21
LIG1-215ENST00000597901 FSHRP23945 695 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 AVPR2P30518 371 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 ACOT2P49753 483 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 ARPP19P56211 112 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 NTHL1P78549 312 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 IER5LQ5T953 404 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 SPATA1Q5VX52 437 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 CD302Q8IX05 232 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 PDILTQ8N807 584 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 APPL2Q8NEU8 664 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 RSAD2Q8WXG1 361 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 IKZF4Q9H2S9 585 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 TBC1D7Q9P0N9 293 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 FBXL5Q9UKA1 691 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms