RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 LAMC2Q13753 1193 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 HAUS6Q7Z4H7 955 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 ZNF556Q9HAH1 456 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 PARP9Q8IXQ6 854 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 MRPL48Q96GC5 212 aaKnown RBP8.42□□□□□ -1.06
FARP1-219ENST00000596580 ZNF518BQ9C0D4 1074 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 PRKAB2O43741 272 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 PLEKHA8P1O95397 391 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 FTLP02792 175 aaPredicted RBP8.42□□□□□ -1.06
FARP1-219ENST00000596580 ZNF135P52742 658 aaPredicted RBP8.42□□□□□ -1.06
FARP1-219ENST00000596580 PCIF1Q9H4Z3 704 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 ANKEF1Q9NU02 776 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 KRT14P02533 472 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 DEFA1P59665 94 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 DEFA3P59666 94 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 EXOSC10Q01780 885 aaKnown RBP8.42□□□□□ -1.06
FARP1-219ENST00000596580 MYBPC2Q14324 1141 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 ERGIC2Q96RQ1 377 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 RBBP8Q99708 897 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 ETNK1Q9HBU6 452 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 APPL1Q9UKG1 709 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 PRKG1Q13976 671 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 CCDC144BQ3MJ40 725 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 GAS2L3Q86XJ1 694 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 INTS2Q9H0H0 1204 aaKnown RBP8.42□□□□□ -1.06
FARP1-219ENST00000596580 ECT2Q9H8V3 914 aa8.42□□□□□ -1.06
FARP1-219ENST00000596580 SRGNP10124 158 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 MAPK1P28482 360 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 MRPS35P82673 323 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 NAB2Q15742 525 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 PHF21AQ96BD5 680 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 SEC31BQ9NQW1 1179 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 NYAP2Q9P242 653 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 SATB2Q9UPW6 733 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 SPATA31A6Q5VVP1 1343 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 E7ENQ6 273 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 SPRP35270 261 aaPredicted RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 FMO5P49326 533 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 CDH6P55285 790 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 GFPT1Q06210 699 aaPredicted RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 SNRNP35Q16560 246 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 BOLA3Q53S33 107 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 EGFL8Q99944 293 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 NDUFA13Q9P0J0 144 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 MYH1P12882 1939 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 MYH4Q9Y623 1939 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 F5H6K3 240 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 STIP1P31948 543 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 KLRC3Q07444 240 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 CDO1Q16878 200 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 SUGP1Q8IWZ8 645 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 IL1RAPL1Q9NZN1 696 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 ZC3H7BQ9UGR2 993 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 AP4S1Q9Y587 144 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 FCGR1AP12314 374 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 FASTKD1Q53R41 847 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 PRPF18Q99633 342 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 FMN2Q9NZ56 1722 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 ANXA9O76027 345 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 DYNLL1P63167 89 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 SLC12A1Q13621 1099 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 DBNDD1Q9H9R9 158 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 USP15Q9Y4E8 981 aaPredicted RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 FDFT1P37268 417 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 CHST13Q8NET6 341 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 TRAF3IP3Q9Y228 551 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 DNAJC6O75061 913 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 PRLRP16471 622 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 HOXB6P17509 224 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 NAPEPLDQ6IQ20 393 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 SCARA5Q6ZMJ2 495 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 ZBTB33Q86T24 672 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 PIH1D3Q9NQM4 214 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 ZNF609O15014 1411 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 RRN3P2A6NIE6 340 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 O00370 1275 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 PPP1R37O75864 691 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.41□□□□□ -1.06
FARP1-219ENST00000596580 SH3GL1Q99961 368 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 MAD2L2Q9UI95 211 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 CDYLQ9Y232 598 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 POTECB2RU33 542 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 TKTP29401 623 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 GCLMP48507 274 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 PDIA2Q13087 525 aaKnown RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 NCOA4Q13772 614 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 IZUMO3Q5VZ72 239 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 TRABDQ9H4I3 376 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 PDP2Q9P2J9 529 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 CFLARO15519 480 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 RAD17O75943 681 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 PAX3P23760 479 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 KPNA1P52294 538 aaPredicted RBP8.41□□□□□ -1.06
FARP1-219ENST00000596580 AGPAT1Q99943 283 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 FAM213AQ9BRX8 229 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 ERAP1Q9NZ08 941 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 ATP1A3P13637 1013 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 COG2Q14746 738 aa8.41□□□□□ -1.06
FARP1-219ENST00000596580 SV2CQ496J9 727 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms