RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TTC26A0AVF1 554 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 TNNC2P02585 160 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 GYPCP04921 128 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 CXCL8P10145 99 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 ACTN1P12814 892 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 KRT9P35527 623 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 WNT7BP56706 349 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 ZBED6P86452 979 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 TFAMQ00059 246 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 GOLGA8FQ08AF8 430 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 GOLGA8DPQ0D2H9 430 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 FAAP100Q0VG06 881 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 ARID5BQ14865 1188 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 SLC10A6Q3KNW5 377 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 KLHDC7AQ5VTJ3 777 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 LMBRD2Q68DH5 695 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 C16orf59Q7L2K0 433 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 LRRC8AQ8IWT6 810 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 HERVK_113Q902F9 699 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 ANKRD36BP1Q96IX9 119 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 ZNF830Q96NB3 372 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 APOL6Q9BWW8 343 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 SLC28A3Q9HAS3 691 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 RAB20Q9NX57 234 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 PARP2Q9UGN5 583 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 PRR33A8MZF0 331 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 PI4K2BG5E9Z4 385 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 TLL1O43897 1013 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 TIMP1P01033 207 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 TMEM191BP0C7N4 346 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 SKIP12755 728 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 POLR2FP61218 127 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 PPIGQ13427 754 aaKnown RBP eCLIP14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 ZACNQ401N2 412 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 EPC2Q52LR7 807 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 WDR44Q5JSH3 913 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 TRAF7Q6Q0C0 670 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 TC2NQ8N9U0 490 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 FBXL13Q8NEE6 735 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 OR8K1Q8NGG5 319 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 PANX2Q96RD6 677 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 NLRC4Q9NPP4 1024 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 ZNHIT6Q9NWK9 470 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 CEP72Q9P209 647 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 YBX2Q9Y2T7 364 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 COQ4Q9Y3A0 265 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 R3HCC1Q9Y3T6 440 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 DAAM1Q9Y4D1 1078 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 PCDHB2Q9Y5E7 798 aa14.09□□□□□ -0.15
SHKBP1-209ENST00000595803 RNF225M0QZC1 329 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 MFAP3LO75121 409 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 NOL4O94818 638 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 ITGA4P13612 1032 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 LRMPQ12912 555 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 TRPC3Q13507 836 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 JADE1Q6IE81 842 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 MFSD5Q6N075 450 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 TRIM65Q6PJ69 517 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 C15orf39Q6ZRI6 1047 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 FAM43BQ6ZT52 329 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 RRAGAQ7L523 313 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 TRAPPC11Q7Z392 1133 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 NT5DC4Q86YG4 428 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 OR5B17Q8NGF7 314 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 LMO3Q8TAP4 145 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 SEMA4DQ92854 862 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 NT5C1BQ96P26 610 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 TSPAN18Q96SJ8 248 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 NUCKS1Q9H1E3 243 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 GANQ9H2C0 597 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 SIX2Q9NPC8 291 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 FAM105AQ9NUU6 356 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 DNAJC12Q9UKB3 198 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 HES2Q9Y543 173 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 IPPQ9Y573 584 aa14.08□□□□□ -0.16
SHKBP1-209ENST00000595803 EPHB6O15197 1021 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 PARNO95453 639 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 HLA-DRAP01903 254 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 UCHL3P15374 230 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 CSF2RAP15509 400 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 AKAP5P24588 427 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 PIK3CAP42336 1068 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 RAB27AP51159 221 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 DSC3Q14574 896 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 TMEM132DQ14C87 1099 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 TDRD10Q5VZ19 366 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 DPY19L2P1Q6NXN4 242 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 PSRC1Q6PGN9 363 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 SMG8Q8ND04 991 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 CCDC112Q8NEF3 446 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 TAS1R2Q8TE23 839 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 SEPT8Q92599 483 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 PGBD4Q96DM1 585 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 KIF12Q96FN5 646 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 SPAG5Q96R06 1193 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 BAG1Q99933 345 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 ADAM2Q99965 735 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 IFIH1Q9BYX4 1025 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms