RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 C2orf16Q68DN1 1984 aa18.61■□□□□ 0.57
CCDC9-202ENST00000595659 VPS37CA5D8V6 355 aaPredicted RBP18.6■□□□□ 0.57
CCDC9-202ENST00000595659 CXCL8P10145 99 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 RFX1P22670 979 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 HOXA9P31269 272 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 NUBP1P53384 320 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 ROR1Q01973 937 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 MCL1Q07820 350 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 MCM6Q14566 821 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 SF3A1Q15459 793 aaKnown RBP18.6■□□□□ 0.57
CCDC9-202ENST00000595659 UVSSAQ2YD98 709 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 ZPBP2Q6X784 338 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 HAUS6Q7Z4H7 955 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 MYCT1Q8N699 235 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 RASSF8Q8NHQ8 419 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 NXPE3Q969Y0 559 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 AK8Q96MA6 479 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 BLOC1S4Q9NUP1 217 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 KCND2Q9NZV8 630 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 LARSQ9P2J5 1176 aaKnown RBP18.6■□□□□ 0.57
CCDC9-202ENST00000595659 DAXXQ9UER7 740 aaPredicted RBP18.6■□□□□ 0.57
CCDC9-202ENST00000595659 KCNG1Q9UIX4 513 aa18.6■□□□□ 0.57
CCDC9-202ENST00000595659 FAM13AO94988 1023 aa18.59■□□□□ 0.57
CCDC9-202ENST00000595659 KRT18P05783 430 aaKnown RBP18.59■□□□□ 0.57
CCDC9-202ENST00000595659 PLCG1P19174 1290 aa18.59■□□□□ 0.57
CCDC9-202ENST00000595659 RPL9P32969 192 aaKnown RBP18.59■□□□□ 0.57
CCDC9-202ENST00000595659 MCM4P33991 863 aa18.59■□□□□ 0.57
CCDC9-202ENST00000595659 TNFSF9P41273 254 aa18.59■□□□□ 0.57
CCDC9-202ENST00000595659 NCKAP1LP55160 1127 aa18.59■□□□□ 0.57
CCDC9-202ENST00000595659 PABPC1LQ4VXU2 614 aaKnown RBP18.59■□□□□ 0.57
CCDC9-202ENST00000595659 SPECC1Q5M775 1068 aa18.59■□□□□ 0.57
CCDC9-202ENST00000595659 ZBTB41Q5SVQ8 909 aa18.59■□□□□ 0.57
CCDC9-202ENST00000595659 KCTD17Q8N5Z5 321 aa18.59■□□□□ 0.57
CCDC9-202ENST00000595659 WDR27A2RRH5 827 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 PRRG1O14668 218 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 GFRA3O60609 400 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 ELF1P32519 619 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 LIG4P49917 911 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 GUCY2FP51841 1108 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 GPC5P78333 572 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 CTXN3Q4LDR2 81 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 DTWD2Q8NBA8 298 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 ZNF461Q8TAF7 563 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 MCRS1Q96EZ8 462 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 KIF12Q96FN5 646 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 TBC1D17Q9HA65 648 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 CYP4F11Q9HBI6 524 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 FBXL5Q9UKA1 691 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 CLIC4Q9Y696 253 aa18.58■□□□□ 0.56
CCDC9-202ENST00000595659 ZFP37Q9Y6Q3 630 aaPredicted RBP18.58■□□□□ 0.56
CCDC9-202ENST00000595659 K7ENM7 598 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 SYN3O14994 580 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 TBC1D4O60343 1298 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 SEC24AO95486 1093 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 SLC8B1Q6J4K2 584 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 USP49Q70CQ1 688 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 BRAPQ7Z569 592 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 CCDC105Q8IYK2 499 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 RAD54LQ92698 747 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 SUSD3Q96L08 255 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 KXD1Q9BQD3 176 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 RTP3Q9BQQ7 232 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 ARHGEF3Q9NR81 526 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 ODF2LQ9ULJ1 636 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 TBX20Q9UMR3 447 aa18.57■□□□□ 0.56
CCDC9-202ENST00000595659 MRPS23Q9Y3D9 190 aaKnown RBP18.57■□□□□ 0.56
CCDC9-202ENST00000595659 TIMM13Q9Y5L4 95 aaPredicted RBP18.57■□□□□ 0.56
CCDC9-202ENST00000595659 PIEZO1Q92508 2521 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 TTC26A0AVF1 554 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 LACTBL1A8MY62 500 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 H0YCG3 227 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 H7C4K7 107 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 HNRNPDLO14979 420 aaKnown RBP18.56■□□□□ 0.56
CCDC9-202ENST00000595659 ABLIM3O94929 683 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 LRG1P02750 347 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 DCNP07585 359 aaKnown RBP18.56■□□□□ 0.56
CCDC9-202ENST00000595659 RHOP08100 348 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 CLTAP09496 248 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 MARCKSP29966 332 aaPredicted RBP18.56■□□□□ 0.56
CCDC9-202ENST00000595659 NMT1P30419 496 aaKnown RBP18.56■□□□□ 0.56
CCDC9-202ENST00000595659 LONP1P36776 959 aaKnown RBP18.56■□□□□ 0.56
CCDC9-202ENST00000595659 CUL4AQ13619 759 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 MRPL58Q14197 206 aaKnown RBP18.56■□□□□ 0.56
CCDC9-202ENST00000595659 SLC5A9Q2M3M2 681 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 FAM173BQ6P4H8 233 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 POTEHQ6S545 545 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 FRMD5Q7Z6J6 570 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 NPAS3Q8IXF0 933 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 DDX12PQ92771 950 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 FAM212AQ96EL1 285 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 EPSTI1Q96J88 318 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 CORO1BQ9BR76 489 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 PARVGQ9HBI0 331 aa18.56■□□□□ 0.56
CCDC9-202ENST00000595659 SLC26A4O43511 780 aa18.55■□□□□ 0.56
CCDC9-202ENST00000595659 TRAK2O60296 914 aa18.55■□□□□ 0.56
CCDC9-202ENST00000595659 BMP15O95972 392 aa18.55■□□□□ 0.56
CCDC9-202ENST00000595659 POU2F2P09086 479 aa18.55■□□□□ 0.56
CCDC9-202ENST00000595659 ATF2P15336 505 aa18.55■□□□□ 0.56
CCDC9-202ENST00000595659 CEBPZQ03701 1054 aaKnown RBP18.55■□□□□ 0.56
CCDC9-202ENST00000595659 SNW1Q13573 536 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms