RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PSMD2Q13200 908 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 MTX1Q13505 466 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 NCAPHQ15003 741 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 TTF1Q15361 905 aaPredicted RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 TEAD2Q15562 447 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 HES3Q5TGS1 186 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 FUT10Q6P4F1 479 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 STOX1Q6ZVD7 989 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 RASSF3Q86WH2 238 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 FCHSD1Q86WN1 690 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 MCF2L2Q86YR7 1114 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 SLC41A1Q8IVJ1 513 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 DHX40Q8IX18 779 aaKnown RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 COLGALT2Q8IYK4 626 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 OLIG1Q8TAK6 271 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 URGCPQ8TCY9 931 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 KCNE4Q8WWG9 221 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 SEPT1Q8WYJ6 367 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 MOCOSQ96EN8 888 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 CNOT6LQ96LI5 555 aaKnown RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 INPP4AQ96PE3 977 aaPredicted RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 FAM193BQ96PV7 902 aaPredicted RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 CDC6Q99741 560 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 MDFIQ99750 246 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 TMEM175Q9BSA9 504 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 NRSN2Q9GZP1 204 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 SMARCAD1Q9H4L7 1026 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 GPRC5CQ9NQ84 441 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.5□□□□□ -1.85
VRK3-204ENST00000593912 TM7SF3Q9NS93 570 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 SMC4Q9NTJ3 1288 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 STK39Q9UEW8 545 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 FARP1Q9Y4F1 1045 aaPredicted RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 RTTNQ86VV8 2226 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 ARID2Q68CP9 1835 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 DCHS2Q6V1P9 2916 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 ARHGEF17Q96PE2 2063 aaPredicted RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 ZNF316A6NFI3 1004 aaPredicted RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 TSPY2A6NKD2 308 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 ZBTB42B2RXF5 422 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 WIPF1O43516 503 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 TNFSF14O43557 240 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 SEMA7AO75326 666 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 C1RP00736 705 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 POU2F2P09086 479 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 MYL4P12829 197 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 KCNA2P16389 499 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 PTPN2P17706 415 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 MAOBP27338 520 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 HOXD12P35452 270 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 TDO2P48775 406 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 SEC13P55735 322 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 BNC1Q01954 994 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 RPL6Q02878 288 aaKnown RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 PTH1RQ03431 593 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 ZNF33AQ06730 810 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 DNAJC3Q13217 504 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 PSMD5Q16401 504 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 QRICH1Q2TAL8 776 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 MAP7D1Q3KQU3 841 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 USP41Q3LFD5 358 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 GNPTABQ3T906 1256 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 STXBP5Q5T5C0 1151 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 PPP1R26Q5T8A7 1209 aaPredicted RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 TRIM68Q6AZZ1 485 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 TWF2Q6IBS0 349 aaKnown RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 TMEM92Q6UXU6 159 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 PDZD4Q76G19 769 aaPredicted RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 TRMT1LQ7Z2T5 733 aaKnown RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 CEP57Q86XR8 500 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 CCDC33Q8N5R6 958 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 METTL13Q8N6R0 699 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 SPATA20Q8TB22 786 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 HASPINQ8TF76 798 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 SSC4DQ8WTU2 575 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 SPACA7Q96KW9 195 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 FAM20AQ96MK3 541 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 TMEM47Q9BQJ4 181 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 ARHGAP9Q9BRR9 750 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 TTPALQ9BTX7 342 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 SLITRK6Q9H5Y7 841 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 GAREM1Q9H706 876 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 TRPV4Q9HBA0 871 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 AVENQ9NQS1 362 aaPredicted RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 WDR70Q9NW82 654 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 MRPL11Q9Y3B7 192 aaKnown RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 WNT6Q9Y6F9 365 aa3.49□□□□□ -1.85
VRK3-204ENST00000593912 ZNF469Q96JG9 3925 aaPredicted RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 TP53BP1Q12888 1972 aaPredicted RBP3.49□□□□□ -1.85
VRK3-204ENST00000593912 KNL1Q8NG31 2342 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ESYT2A0FGR8 921 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 TRDMT1O14717 391 aaKnown RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 N4BP3O15049 544 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 FLRT2O43155 660 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 AP5Z1O43299 807 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ATMINO43313 823 aaPredicted RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 PPP1R11O60927 126 aaPredicted RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 C22orf31O95567 290 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 LRG1P02750 347 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 MPOP05164 745 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms