RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 CFAP221Q4G0U5 840 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 UMODL1Q5DID0 1318 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 CEP120Q8N960 986 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 DDX1Q92499 740 aaKnown RBP12.8□□□□□ -0.36
NPC1-214ENST00000593280 NRCAMQ92823 1304 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 KAT2BQ92831 832 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 CPB2Q96IY4 423 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 GOLPH3Q9H4A6 298 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 OSGEPQ9NPF4 335 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 Q9Y3F1 56 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 NUB1Q9Y5A7 615 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 PCDHB4Q9Y5E5 795 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 PCDHB2Q9Y5E7 798 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 RALGAPA2Q2PPJ7 1873 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 GPR25O00155 361 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 CES2O00748 559 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 TSPAN1O60635 241 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 MYL3P08590 195 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 STAG3L1P0CL83 205 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 ARF4P18085 180 aaPredicted RBP12.8□□□□□ -0.36
NPC1-214ENST00000593280 TM4SF4P48230 202 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 PSEN2P49810 448 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 HADHBP55084 474 aaKnown RBP12.8□□□□□ -0.36
NPC1-214ENST00000593280 MYL6P60660 151 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 TCEAL1Q15170 157 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 CLEC16AQ2KHT3 1053 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 SGSM1Q2NKQ1 1148 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 TMCO3Q6UWJ1 677 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 EFCAB13Q8IY85 973 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 FAM49AQ9H0Q0 323 aaPredicted RBP12.8□□□□□ -0.36
NPC1-214ENST00000593280 PDCL3Q9H2J4 239 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 CTTNBP2NLQ9P2B4 639 aa12.8□□□□□ -0.36
NPC1-214ENST00000593280 KCNK3O14649 394 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 CA12O43570 354 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
NPC1-214ENST00000593280 IGHA2P01877 340 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 TUBBP07437 444 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 CDC42EP1Q00587 391 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 POU5F1Q01860 360 aaKnown RBP12.79□□□□□ -0.36
NPC1-214ENST00000593280 BRD3Q15059 726 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 ZNF699Q32M78 642 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 CCDC70Q6NSX1 233 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 TMEM270Q6UE05 265 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 NT5DC3Q86UY8 548 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 TMEM192Q8IY95 271 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 RBBP8NLQ8NC74 664 aaPredicted RBP12.79□□□□□ -0.36
NPC1-214ENST00000593280 SPATA4Q8NEY3 305 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 PBKQ96KB5 322 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 PNKPQ96T60 521 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 ADPGKQ9BRR6 497 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 NIF3L1Q9GZT8 377 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
NPC1-214ENST00000593280 SMARCAL1Q9NZC9 954 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 EHD2Q9NZN4 543 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 AMFRQ9UKV5 643 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 RAB21Q9UL25 225 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 CNTN6Q9UQ52 1028 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 STXBP5LQ9Y2K9 1186 aa12.79□□□□□ -0.36
NPC1-214ENST00000593280 SMIM35A0A1B0GVV1 85 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 MBLAC1A4D2B0 266 aaPredicted RBP12.78□□□□□ -0.36
NPC1-214ENST00000593280 CCDC151A5D8V7 595 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 HAS3O00219 553 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 CST3P01034 146 aaPredicted RBP12.78□□□□□ -0.36
NPC1-214ENST00000593280 CALCAP01258 141 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 CYP2C9P11712 490 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 AKR1A1P14550 325 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 FCGRTP55899 365 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 PTPROQ16827 1216 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 ACAD10Q6JQN1 1059 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 C11orf63Q6NUN7 778 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
NPC1-214ENST00000593280 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
NPC1-214ENST00000593280 MMGT1Q8N4V1 131 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 ZNF653Q96CK0 615 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 MS4A14Q96JA4 679 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 HHIPL1Q96JK4 782 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 SELENOOQ9BVL4 669 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 KATNAL1Q9BW62 490 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 GCOM2Q9BZD3 368 aaPredicted RBP12.78□□□□□ -0.36
NPC1-214ENST00000593280 ADAMTS10Q9H324 1103 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 COG5Q9UP83 839 aa12.78□□□□□ -0.36
NPC1-214ENST00000593280 TARSL2A2RTX5 802 aaKnown RBP12.77□□□□□ -0.36
NPC1-214ENST00000593280 TMEM88BA6NKF7 163 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 LACTBL1A8MY62 500 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.36
NPC1-214ENST00000593280 MTA2O94776 668 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 CYP1A2P05177 515 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 NFICP08651 508 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 MCM3P25205 808 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 CTGFP29279 349 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 GNA15P30679 374 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 IRX5P78411 483 aaPredicted RBP12.77□□□□□ -0.36
NPC1-214ENST00000593280 BEX3Q00994 111 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 TMEM62Q0P6H9 643 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 FSCN1Q16658 493 aaKnown RBP12.77□□□□□ -0.36
NPC1-214ENST00000593280 DCAF4L1Q3SXM0 396 aa12.77□□□□□ -0.36
NPC1-214ENST00000593280 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.36
NPC1-214ENST00000593280 TRIM72Q6ZMU5 477 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms