RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 XKR4Q5GH76 650 aa14.46□□□□□ -0.09
H3F3B-213ENST00000593254 GLRA4Q5JXX5 417 aa14.46□□□□□ -0.09
H3F3B-213ENST00000593254 RTP2Q5QGT7 225 aa14.46□□□□□ -0.09
H3F3B-213ENST00000593254 ALKAL1Q6UXT8 129 aa14.46□□□□□ -0.09
H3F3B-213ENST00000593254 PJA1Q8NG27 643 aa14.46□□□□□ -0.09
H3F3B-213ENST00000593254 LRRC15Q8TF66 581 aa14.46□□□□□ -0.09
H3F3B-213ENST00000593254 ZNF707Q96C28 371 aaPredicted RBP14.46□□□□□ -0.09
H3F3B-213ENST00000593254 CALML4Q96GE6 196 aa14.46□□□□□ -0.09
H3F3B-213ENST00000593254 CCDC94Q9BW85 323 aaPredicted RBP14.46□□□□□ -0.09
H3F3B-213ENST00000593254 TOPORSQ9NS56 1045 aaPredicted RBP14.46□□□□□ -0.09
H3F3B-213ENST00000593254 MYH15Q9Y2K3 1946 aa14.46□□□□□ -0.09
H3F3B-213ENST00000593254 SMIM28A0A1B0GU29 152 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 TMEM189-UBE2V1I3L0A0 370 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 TGM5O43548 720 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 RFPL2O75678 378 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 MAPTP10636 758 aaKnown RBP14.45□□□□□ -0.1
H3F3B-213ENST00000593254 SMTNP53814 917 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 YARSP54577 528 aaKnown RBP14.45□□□□□ -0.1
H3F3B-213ENST00000593254 STARD6P59095 220 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 ELAVL2Q12926 359 aaKnown RBP14.45□□□□□ -0.1
H3F3B-213ENST00000593254 STRN3Q13033 797 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 ZNF528Q3MIS6 628 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 ELMSAN1Q6PJG2 1045 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 PRSS55Q6UWB4 352 aaPredicted RBP14.45□□□□□ -0.1
H3F3B-213ENST00000593254 MPZL3Q6UWV2 235 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 HDAC7Q8WUI4 952 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 PIK3R5Q8WYR1 880 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 KCNN1Q92952 543 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 BORCS6Q96GS4 357 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 INTS4Q96HW7 963 aaKnown RBP14.45□□□□□ -0.1
H3F3B-213ENST00000593254 TTPALQ9BTX7 342 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 PLEKHA4Q9H4M7 779 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 BLOC1S4Q9NUP1 217 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 LARSQ9P2J5 1176 aaKnown RBP14.45□□□□□ -0.1
H3F3B-213ENST00000593254 ODF2LQ9ULJ1 636 aa14.45□□□□□ -0.1
H3F3B-213ENST00000593254 NPHP3-ACAD11A0A0J9YXS1 232 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 KINO60870 393 aaKnown RBP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 TOM1L1O75674 476 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 LAMP2P13473 410 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 RPL17P18621 184 aaKnown RBP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 SYT1P21579 422 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 ATXN1P54253 815 aaKnown RBP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 NCKAP1LP55160 1127 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 OSTNP61366 133 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 HTR4Q13639 388 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 KARSQ15046 597 aaKnown RBP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 PTPAQ15257 358 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 UPP1Q16831 310 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 VARS2Q5ST30 1063 aaKnown RBP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 FAM171A1Q5VUB5 890 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 LILRA6Q6PI73 481 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 DCLRE1AQ6PJP8 1040 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 ZPBP2Q6X784 338 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 PALB2Q86YC2 1186 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 LNX1Q8TBB1 728 aaPredicted RBP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 ZBTB45Q96K62 511 aaPredicted RBP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 UROC1Q96N76 676 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 REEP2Q9BRK0 252 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 TCHPQ9BT92 498 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 FOXQ1Q9C009 403 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 ASPMQ8IZT6 3477 aa14.44□□□□□ -0.1
H3F3B-213ENST00000593254 CNOT1A5YKK6 2376 aaKnown RBP14.44□□□□□ -0.1
H3F3B-213ENST00000593254 SPTLC1O15269 473 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 SPATA31D3P0C874 917 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 KCNE1P15382 129 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 PLCG1P19174 1290 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 SDHBP21912 280 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 IGFBP6P24592 240 aaPredicted RBP14.43□□□□□ -0.1
H3F3B-213ENST00000593254 CLCNKBP51801 687 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 ZNF131P52739 623 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 SOX4Q06945 474 aaPredicted RBP14.43□□□□□ -0.1
H3F3B-213ENST00000593254 RESTQ13127 1097 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 NOLC1Q14978 699 aaKnown RBP eCLIP14.43□□□□□ -0.17e-17■□□□□ 11.2
H3F3B-213ENST00000593254 PSMD5Q16401 504 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 CD300LGQ6UXG3 332 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.43□□□□□ -0.1
H3F3B-213ENST00000593254 SPATA31D4Q6ZUB0 917 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 GPBP1Q86WP2 473 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 CEP57Q86XR8 500 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 GLYCTKQ8IVS8 523 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 C3orf58Q8NDZ4 430 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 SMG7Q92540 1137 aaKnown RBP14.43□□□□□ -0.1
H3F3B-213ENST00000593254 RAD54LQ92698 747 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 ZMAT2Q96NC0 199 aaKnown RBP14.43□□□□□ -0.1
H3F3B-213ENST00000593254 ACAP3Q96P50 834 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 CLSTN3Q9BQT9 956 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 DDX23Q9BUQ8 820 aaKnown RBP14.43□□□□□ -0.1
H3F3B-213ENST00000593254 CCSER1Q9C0I3 900 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 GOLGA2P5Q9HBQ8 144 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 ZDHHC7Q9NXF8 308 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 CNTN3Q9P232 1028 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 ANKFY1Q9P2R3 1169 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 CLIC4Q9Y696 253 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 BAHCC1Q9P281 2608 aa14.43□□□□□ -0.1
H3F3B-213ENST00000593254 COL4A3Q01955 1670 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 H0YCG3 227 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 K7ELQ4 463 aaPredicted RBP14.42□□□□□ -0.1
H3F3B-213ENST00000593254 MEFVO15553 781 aaPredicted RBP14.42□□□□□ -0.1
H3F3B-213ENST00000593254 LRRN2O75325 713 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms