RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 FSHRP23945 695 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 PTPAQ15257 358 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 SEZ6Q53EL9 994 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 VARS2Q5ST30 1063 aaKnown RBP25.4■■□□□ 1.66
MBD3-211ENST00000592965 SLC8B1Q6J4K2 584 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 GRASPQ7Z6J2 395 aaPredicted RBP25.4■■□□□ 1.66
MBD3-211ENST00000592965 MYCT1Q8N699 235 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 INTS4Q96HW7 963 aaKnown RBP25.4■■□□□ 1.66
MBD3-211ENST00000592965 MFSD1Q9H3U5 465 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 TBX20Q9UMR3 447 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 CLIC4Q9Y696 253 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 K7ENM7 598 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 HNRNPDLO14979 420 aaKnown RBP25.39■■□□□ 1.66
MBD3-211ENST00000592965 CCL16O15467 120 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 KRT18P05783 430 aaKnown RBP25.39■■□□□ 1.66
MBD3-211ENST00000592965 CXCL8P10145 99 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 SYT1P21579 422 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 MATR3P43243 847 aaKnown RBP eCLIP25.39■■□□□ 1.66
MBD3-211ENST00000592965 LIG4P49917 911 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 CLCN5P51795 746 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 RESTQ13127 1097 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 KYAT1Q16773 422 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 ASTLQ6HA08 431 aaPredicted RBP25.39■■□□□ 1.66
MBD3-211ENST00000592965 ALYREFQ86V81 257 aaKnown RBP25.39■■□□□ 1.66
MBD3-211ENST00000592965 TMEM105Q8N8V8 129 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 RSAD2Q8WXG1 361 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 LARP4BQ92615 738 aaKnown RBP25.39■■□□□ 1.66
MBD3-211ENST00000592965 BACH2Q9BYV9 841 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 NUB1Q9Y5A7 615 aa25.39■■□□□ 1.66
MBD3-211ENST00000592965 TTC26A0AVF1 554 aa25.38■■□□□ 1.65
MBD3-211ENST00000592965 ANHXE9PGG2 379 aa25.38■■□□□ 1.65
MBD3-211ENST00000592965 TBC1D4O60343 1298 aa25.38■■□□□ 1.65
MBD3-211ENST00000592965 TBCAO75347 108 aaKnown RBP25.38■■□□□ 1.65
MBD3-211ENST00000592965 ABCD1P33897 745 aa25.38■■□□□ 1.65
MBD3-211ENST00000592965 MRE11P49959 708 aa25.38■■□□□ 1.65
MBD3-211ENST00000592965 HTR4Q13639 388 aa25.38■■□□□ 1.65
MBD3-211ENST00000592965 SUSD3Q96L08 255 aa25.38■■□□□ 1.65
MBD3-211ENST00000592965 TUBGCP4Q9UGJ1 667 aa25.38■■□□□ 1.65
MBD3-211ENST00000592965 FBXO2Q9UK22 296 aaPredicted RBP25.38■■□□□ 1.65
MBD3-211ENST00000592965 NARSO43776 548 aaKnown RBP25.37■■□□□ 1.65
MBD3-211ENST00000592965 TRAK2O60296 914 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 FAM189A1O60320 539 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 NTHL1P78549 312 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 ROR1Q01973 937 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 MRPL58Q14197 206 aaKnown RBP25.37■■□□□ 1.65
MBD3-211ENST00000592965 CWF19L1Q69YN2 538 aaKnown RBP25.37■■□□□ 1.65
MBD3-211ENST00000592965 SLC44A3Q8N4M1 653 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 ZNF461Q8TAF7 563 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 EPSTI1Q96J88 318 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 FIZ1Q96SL8 496 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 IRF2BPLQ9H1B7 796 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 FBXL21Q9UKT6 434 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 CDH7Q9ULB5 785 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 MYH15Q9Y2K3 1946 aa25.37■■□□□ 1.65
MBD3-211ENST00000592965 H7C4K7 107 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 OGTO15294 1046 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 GALR2O43603 387 aaPredicted RBP25.36■■□□□ 1.65
MBD3-211ENST00000592965 SRFP11831 508 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 DDIT3P35638 169 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 USP49Q70CQ1 688 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 MAP4K3Q8IVH8 894 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 WNT16Q9UBV4 365 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 STK17AQ9UEE5 414 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 POLIQ9UNA4 740 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 SRPRBQ9Y5M8 271 aaKnown RBP25.36■■□□□ 1.65
MBD3-211ENST00000592965 GTF3C3Q9Y5Q9 886 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 MORC2Q9Y6X9 1032 aaPredicted RBP25.36■■□□□ 1.65
MBD3-211ENST00000592965 ANK1P16157 1881 aa25.36■■□□□ 1.65
MBD3-211ENST00000592965 A0A0B4J269 797 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 ABLIM3O94929 683 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 CYP3A5P20815 502 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 MARCKSP29966 332 aaPredicted RBP25.35■■□□□ 1.65
MBD3-211ENST00000592965 LRPAP1P30533 357 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 MCM4P33991 863 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 TNFSF9P41273 254 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 GTF2BQ00403 316 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 PPP2R3AQ06190 1150 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 ZBTB6Q15916 424 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 ENOX2Q16206 610 aaKnown RBP25.35■■□□□ 1.65
MBD3-211ENST00000592965 SIX5Q8N196 739 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 APPL2Q8NEU8 664 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 TSPAN18Q96SJ8 248 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 ST6GALNAC4Q9H4F1 302 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 ZHX3Q9H4I2 956 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 KCNH3Q9ULD8 1083 aa25.35■■□□□ 1.65
MBD3-211ENST00000592965 UBQLN1Q9UMX0 589 aaKnown RBP25.35■■□□□ 1.65
MBD3-211ENST00000592965 ZFHX2Q9C0A1 2572 aaPredicted RBP25.35■■□□□ 1.65
MBD3-211ENST00000592965 ARHGEF37A1IGU5 675 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 WDR27A2RRH5 827 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 ADRB2P07550 413 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 NPR3P17342 541 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 SPECC1Q5M775 1068 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 ZBTB41Q5SVQ8 909 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 ZNF280DQ6N043 979 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 SLC39A4Q6P5W5 647 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 FGF13Q92913 245 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 KIF12Q96FN5 646 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 CCDC39Q9UFE4 941 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 FBXL5Q9UKA1 691 aa25.34■■□□□ 1.65
MBD3-211ENST00000592965 PCDHB8Q9UN66 801 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms