RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 NCOR1O75376 2440 aa16.47■□□□□ 0.23
ERCC1-217ENST00000592905 SF3B1O75533 1304 aaKnown RBP eCLIP16.46■□□□□ 0.23
ERCC1-217ENST00000592905 CLIC2O15247 247 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 EIF3DO15371 548 aaKnown RBP eCLIP16.46■□□□□ 0.23
ERCC1-217ENST00000592905 NFICP08651 508 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 EPCAMP16422 314 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 RPL17P18621 184 aaKnown RBP16.46■□□□□ 0.23
ERCC1-217ENST00000592905 GARTP22102 1010 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 KLRC2P26717 231 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 DSG1Q02413 1049 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 DPYDQ12882 1025 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 KCNC3Q14003 757 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 ZBTB6Q15916 424 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 RTP2Q5QGT7 225 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 PTCRAQ6ISU1 281 aaPredicted RBP16.46■□□□□ 0.23
ERCC1-217ENST00000592905 ARMCX5Q6P1M9 558 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 PRSS55Q6UWB4 352 aaPredicted RBP16.46■□□□□ 0.23
ERCC1-217ENST00000592905 GLYCTKQ8IVS8 523 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 ENGASEQ8NFI3 743 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 DDX27Q96GQ7 796 aaKnown RBP16.46■□□□□ 0.23
ERCC1-217ENST00000592905 STK39Q9UEW8 545 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 HCFC2Q9Y5Z7 792 aa16.46■□□□□ 0.23
ERCC1-217ENST00000592905 SCN1AP35498 2009 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 TEX28O15482 410 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 TGFB1I1O43294 461 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 ADRB2P07550 413 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 IL9P15248 144 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 RPL9P32969 192 aaKnown RBP16.45■□□□□ 0.22
ERCC1-217ENST00000592905 WNT7BP56706 349 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 PNOCQ13519 176 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 SNW1Q13573 536 aaKnown RBP16.45■□□□□ 0.22
ERCC1-217ENST00000592905 KIAA0895Q8NCT3 520 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 MSLNLQ96KJ4 702 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 FAM84AQ96KN4 292 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 NECAB3Q96P71 396 aaPredicted RBP16.45■□□□□ 0.22
ERCC1-217ENST00000592905 TTPALQ9BTX7 342 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 EMILIN2Q9BXX0 1053 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 CD207Q9UJ71 328 aa16.45■□□□□ 0.22
ERCC1-217ENST00000592905 UBQLN1Q9UMX0 589 aaKnown RBP16.45■□□□□ 0.22
ERCC1-217ENST00000592905 MTCL1Q9Y4B5 1905 aaKnown RBP16.45■□□□□ 0.22
ERCC1-217ENST00000592905 TMEM189-UBE2V1I3L0A0 370 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 PPEF2O14830 753 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 SPATA31D3P0C874 917 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 TMEM132DQ14C87 1099 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 SPATA31D4Q6ZUB0 917 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 PALB2Q86YC2 1186 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 CD302Q8IX05 232 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 C12orf76Q8N812 135 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-217ENST00000592905 SLC22A17Q8WUG5 538 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 ERCC4Q92889 916 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-217ENST00000592905 COL25A1Q9BXS0 654 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-217ENST00000592905 HSPBP1Q9NZL4 362 aa16.44■□□□□ 0.22
ERCC1-217ENST00000592905 GRXCR2A6NFK2 248 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 EXTL3O43909 919 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 LDHAP00338 332 aaKnown RBP16.43■□□□□ 0.22
ERCC1-217ENST00000592905 MYL1P05976 194 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 TKTP29401 623 aaKnown RBP16.43■□□□□ 0.22
ERCC1-217ENST00000592905 CYP2J2P51589 502 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 PSMD2Q13200 908 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 SPATA1Q5VX52 437 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 ANKRD54Q6NXT1 300 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 SYCE2Q6PIF2 218 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 TMEM184AQ6ZMB5 413 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 GPD1LQ8N335 351 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 RDH13Q8NBN7 331 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 LNX1Q8TBB1 728 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-217ENST00000592905 FEZF2Q8TBJ5 459 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 ADAMTS19Q8TE59 1207 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 ASB7Q9H672 318 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 RXFP1Q9HBX9 757 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 AGPAT3Q9NRZ7 376 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 RBAKQ9NYW8 714 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-217ENST00000592905 MAPK8IP1Q9UQF2 711 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 SSX2IPQ9Y2D8 614 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 NUB1Q9Y5A7 615 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 UBE4BO95155 1302 aa16.43■□□□□ 0.22
ERCC1-217ENST00000592905 MBTPS2O43462 519 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 TRAPPC3O43617 180 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 CYP3A5P20815 502 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 FGFR3P22607 806 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 LRPAP1P30533 357 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 MCM4P33991 863 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 CLCN4P51793 760 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 ELAVL2Q12926 359 aaKnown RBP16.42■□□□□ 0.22
ERCC1-217ENST00000592905 PSMD5Q16401 504 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 KNOP1Q1ED39 458 aaKnown RBP16.42■□□□□ 0.22
ERCC1-217ENST00000592905 BMT2Q1RMZ1 405 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-217ENST00000592905 CBWD2Q8IUF1 395 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 BRSK2Q8IWQ3 736 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 BEST2Q8NFU1 509 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 CASP10Q92851 521 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 CLSTN3Q9BQT9 956 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 PDE11AQ9HCR9 933 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 CDH22Q9UJ99 828 aa16.42■□□□□ 0.22
ERCC1-217ENST00000592905 FSD2A1L4K1 749 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 ADAM12O43184 909 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms