RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 C12orf56Q8IXR9 622 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 ELOA2Q8IYF1 753 aaPredicted RBP12.88□□□□□ -0.35
H3F3B-212ENST00000592643 EFHBQ8N7U6 833 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 MICAL1Q8TDZ2 1067 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 TMEM174Q8WUU8 243 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
H3F3B-212ENST00000592643 KIF12Q96FN5 646 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 MSLNLQ96KJ4 702 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 COLEC11Q9BWP8 271 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 IGFLR1Q9H665 355 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 UBE2ZQ9H832 354 aaPredicted RBP12.88□□□□□ -0.35
H3F3B-212ENST00000592643 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 MAPK8IP1Q9UQF2 711 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 BDP1A6H8Y1 2624 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 ANO9A1A5B4 782 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 ADAM12O43184 909 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 TADA2AO75478 443 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 B3GAT3O94766 335 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 CYP3A5P20815 502 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 FGFR3P22607 806 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
H3F3B-212ENST00000592643 KCNQ1P51787 676 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 PPP2R3AQ06190 1150 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
H3F3B-212ENST00000592643 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 PRSS55Q6UWB4 352 aaPredicted RBP12.87□□□□□ -0.35
H3F3B-212ENST00000592643 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.35
H3F3B-212ENST00000592643 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.87□□□□□ -0.35
H3F3B-212ENST00000592643 LNX1Q8TBB1 728 aaPredicted RBP12.87□□□□□ -0.35
H3F3B-212ENST00000592643 SLC22A17Q8WUG5 538 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 HLA-CQ95604 372 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 UROC1Q96N76 676 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 KLHL5Q96PQ7 755 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 ASB7Q9H672 318 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 TLE6Q9H808 572 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 RXFP1Q9HBX9 757 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 SLC38A7Q9NVC3 462 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
H3F3B-212ENST00000592643 TDRD15B5MCY1 1934 aaKnown RBP12.87□□□□□ -0.35
H3F3B-212ENST00000592643 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 CARNS1A5YM72 827 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 H3BQ06 376 aaPredicted RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 PIRO00625 290 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 C2CD2LO14523 706 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 TEX28O15482 410 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 KCNA5P22460 613 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 TKTP29401 623 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 GLUD2P49448 558 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 CASP4P49662 377 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 CYP2J2P51589 502 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 SKIV2LQ15477 1246 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 FAM171A1Q5VUB5 890 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 C9orf57Q5W0N0 161 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 KANK3Q6NY19 840 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 TMEM184AQ6ZMB5 413 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 GUF1Q8N442 669 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 OR5B17Q8NGF7 314 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 DDX27Q96GQ7 796 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 CLSTN3Q9BQT9 956 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 CLDND1Q9NY35 253 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 RBAKQ9NYW8 714 aaPredicted RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 CDH22Q9UJ99 828 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 BARX2Q9UMQ3 279 aaPredicted RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 UBQLN1Q9UMX0 589 aaKnown RBP12.86□□□□□ -0.35
H3F3B-212ENST00000592643 DERAQ9Y315 318 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 HCFC2Q9Y5Z7 792 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 CUL9Q8IWT3 2517 aa12.86□□□□□ -0.35
H3F3B-212ENST00000592643 SF3B1O75533 1304 aaKnown RBP eCLIP12.86□□□□□ -0.354e-7■■■■■ 28.9
H3F3B-212ENST00000592643 TBC1D4O60343 1298 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 BMP1P13497 986 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 EPCAMP16422 314 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 PRCPP42785 496 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 SNRPFP62306 86 aaKnown RBP12.85□□□□□ -0.35
H3F3B-212ENST00000592643 MRPL58Q14197 206 aaKnown RBP12.85□□□□□ -0.35
H3F3B-212ENST00000592643 TMEM132DQ14C87 1099 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 SNRNP35Q16560 246 aaKnown RBP12.85□□□□□ -0.35
H3F3B-212ENST00000592643 USP41Q3LFD5 358 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 C1orf220Q5T0J3 134 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 SYCE2Q6PIF2 218 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 SLC9A9Q8IVB4 645 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 CD302Q8IX05 232 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 C1orf127Q8N9H9 656 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 RDH13Q8NBN7 331 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 RIN2Q8WYP3 895 aaPredicted RBP12.85□□□□□ -0.35
H3F3B-212ENST00000592643 PIK3R5Q8WYR1 880 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
H3F3B-212ENST00000592643 MFSD14AQ96MC6 490 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms