RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 WASHC2DQ5SRD0 308 aa19.11■□□□□ 0.65
SPC24-206ENST00000592540 TRAPPC3LQ5T215 181 aa19.11■□□□□ 0.65
SPC24-206ENST00000592540 CYP4F22Q6NT55 531 aa19.11■□□□□ 0.65
SPC24-206ENST00000592540 ZNF449Q6P9G9 518 aa19.11■□□□□ 0.65
SPC24-206ENST00000592540 LMNTD2Q8IXW0 634 aa19.11■□□□□ 0.65
SPC24-206ENST00000592540 CCDC89Q8N998 374 aa19.11■□□□□ 0.65
SPC24-206ENST00000592540 ASAP3Q8TDY4 903 aa19.11■□□□□ 0.65
SPC24-206ENST00000592540 EXOC1LA0A1B0GW35 172 aa19.1■□□□□ 0.65
SPC24-206ENST00000592540 EDF1O60869 148 aaKnown RBP19.1■□□□□ 0.65
SPC24-206ENST00000592540 PADI6Q6TGC4 694 aa19.1■□□□□ 0.65
SPC24-206ENST00000592540 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.1■□□□□ 0.65
SPC24-206ENST00000592540 SPDYE1Q8NFV5 336 aaPredicted RBP19.1■□□□□ 0.65
SPC24-206ENST00000592540 C10orf82Q8WW14 230 aa19.1■□□□□ 0.65
SPC24-206ENST00000592540 DDX27Q96GQ7 796 aaKnown RBP19.1■□□□□ 0.65
SPC24-206ENST00000592540 RBM15Q96T37 977 aaKnown RBP eCLIP19.1■□□□□ 0.65
SPC24-206ENST00000592540 HEMGNQ9BXL5 484 aa19.1■□□□□ 0.65
SPC24-206ENST00000592540 COA1Q9GZY4 146 aa19.1■□□□□ 0.65
SPC24-206ENST00000592540 GRID1Q9ULK0 1009 aa19.1■□□□□ 0.65
SPC24-206ENST00000592540 ATRNL1Q5VV63 1379 aa19.1■□□□□ 0.65
SPC24-206ENST00000592540 UPP2O95045 317 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 CFBP00751 764 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 RASSF2P50749 326 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 UBXN2AP68543 259 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 SARNPP82979 210 aaKnown RBP19.09■□□□□ 0.65
SPC24-206ENST00000592540 TCP10Q12799 353 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 KLF1Q13351 362 aaPredicted RBP19.09■□□□□ 0.65
SPC24-206ENST00000592540 ALCAMQ13740 583 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 PDK4Q16654 411 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 CLEC16AQ2KHT3 1053 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 HHIPL2Q6UWX4 724 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 FAM118BQ9BPY3 351 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 WDR11Q9BZH6 1224 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 TRABDQ9H4I3 376 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 LARSQ9P2J5 1176 aaKnown RBP19.09■□□□□ 0.65
SPC24-206ENST00000592540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.09■□□□□ 0.65
SPC24-206ENST00000592540 CBX6O95503 412 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 ADRB2P07550 413 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 RALAP11233 206 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 BMP3P12645 472 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 PTDSS1P48651 473 aaKnown RBP19.09■□□□□ 0.65
SPC24-206ENST00000592540 SLC18A1P54219 525 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 MRPS35P82673 323 aaKnown RBP19.09■□□□□ 0.65
SPC24-206ENST00000592540 CCNG2Q16589 344 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 TTC8Q8TAM2 541 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 HELQQ8TDG4 1101 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 SH3TC2Q8TF17 1288 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 TEKT1Q969V4 418 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 CFAP57Q96MR6 1250 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 ZNF577Q9BSK1 485 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 KIAA1586Q9HCI6 787 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 MROH7Q68CQ1 1323 aa19.09■□□□□ 0.65
SPC24-206ENST00000592540 DDTLA6NHG4 134 aaPredicted RBP19.08■□□□□ 0.65
SPC24-206ENST00000592540 TRAFD1O14545 582 aaPredicted RBP19.08■□□□□ 0.65
SPC24-206ENST00000592540 ABLIM1O14639 778 aa19.08■□□□□ 0.65
SPC24-206ENST00000592540 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.65
SPC24-206ENST00000592540 TMEM179Q6ZVK1 233 aa19.08■□□□□ 0.65
SPC24-206ENST00000592540 ZCCHC9Q8N567 271 aaKnown RBP19.08■□□□□ 0.65
SPC24-206ENST00000592540 SUPT20HQ8NEM7 779 aa19.08■□□□□ 0.65
SPC24-206ENST00000592540 LRRC8CQ8TDW0 803 aa19.08■□□□□ 0.65
SPC24-206ENST00000592540 KIFAP3Q92845 792 aa19.08■□□□□ 0.65
SPC24-206ENST00000592540 DENND2DQ9H6A0 471 aaPredicted RBP19.08■□□□□ 0.65
SPC24-206ENST00000592540 GOLGA8IPA6NC78 632 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 GOLGA8JA6NMD2 632 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 H0Y3Z8 333 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 PDHA1P08559 390 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 ARP10275 920 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 MAPTP10636 758 aaKnown RBP19.08■□□□□ 0.64
SPC24-206ENST00000592540 SLC1A1P43005 524 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 CACNB3P54284 484 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 CEP55Q53EZ4 464 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.08■□□□□ 0.64
SPC24-206ENST00000592540 PARD3BQ8TEW8 1205 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 DHX38Q92620 1227 aaKnown RBP19.08■□□□□ 0.64
SPC24-206ENST00000592540 ZBTB10Q96DT7 871 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
SPC24-206ENST00000592540 ENTPD5O75356 428 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 GDF11O95390 407 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 FESP07332 822 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 ACADSP16219 412 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 KLRC2P26717 231 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 ADSSP30520 456 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 RPA3P35244 121 aaPredicted RBP19.07■□□□□ 0.64
SPC24-206ENST00000592540 INHBEP58166 350 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 PKN2Q16513 984 aaKnown RBP19.07■□□□□ 0.64
SPC24-206ENST00000592540 SPDYAQ5MJ70 313 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 THEMIS2Q5TEJ8 643 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 CEP128Q6ZU80 1094 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 TDRPQ86YL5 185 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 CEP120Q8N960 986 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 FOXP3Q9BZS1 431 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 SAYSD1Q9NPB0 183 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 PI4KBQ9UBF8 816 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 RPL26L1Q9UNX3 145 aaKnown RBP19.07■□□□□ 0.64
SPC24-206ENST00000592540 SMG5Q9UPR3 1016 aaKnown RBP19.07■□□□□ 0.64
SPC24-206ENST00000592540 POC1B-GALNT4F8VUJ3 575 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 AHCYL1O43865 530 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 P3H1Q32P28 736 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 TAF1BQ53T94 588 aaPredicted RBP19.07■□□□□ 0.64
SPC24-206ENST00000592540 DAB2IPQ5VWQ8 1189 aa19.07■□□□□ 0.64
SPC24-206ENST00000592540 B3GNT9Q6UX72 402 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms