RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 RFX1P22670 979 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 STARD6P59095 220 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 MCL1Q07820 350 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 NOLC1Q14978 699 aaKnown RBP eCLIP20.62■□□□□ 0.89
CCDC43-205ENST00000592333 TMEM119Q4V9L6 283 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 PABPC1LQ4VXU2 614 aaKnown RBP20.62■□□□□ 0.89
CCDC43-205ENST00000592333 TPGS2Q68CL5 300 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 TCEAL8Q8IYN2 117 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 GPR152Q8TDT2 470 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 ZMAT2Q96NC0 199 aaKnown RBP20.62■□□□□ 0.89
CCDC43-205ENST00000592333 PNMA5Q96PV4 448 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 OXCT2Q9BYC2 517 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-205ENST00000592333 GOLGA2P5Q9HBQ8 144 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 ARHGEF3Q9NR81 526 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 GDE1Q9NZC3 331 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-205ENST00000592333 NUB1Q9Y5A7 615 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 TRIP11Q15643 1979 aa20.62■□□□□ 0.89
CCDC43-205ENST00000592333 VWA3AA6NCI4 1184 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 GJB2P29033 226 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 ELF1P32519 619 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 BRCC3P46736 316 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 OSTNP61366 133 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 PFKPQ01813 784 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 VARS2Q5ST30 1063 aaKnown RBP20.61■□□□□ 0.89
CCDC43-205ENST00000592333 RSPO2Q6UXX9 243 aaPredicted RBP20.61■□□□□ 0.89
CCDC43-205ENST00000592333 APPL2Q8NEU8 664 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 NKD2Q969F2 451 aaPredicted RBP20.61■□□□□ 0.89
CCDC43-205ENST00000592333 SUSD3Q96L08 255 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 TBC1D17Q9HA65 648 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 DNMT3BQ9UBC3 853 aaKnown RBP20.61■□□□□ 0.89
CCDC43-205ENST00000592333 POLIQ9UNA4 740 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 SIT1Q9Y3P8 196 aa20.61■□□□□ 0.89
CCDC43-205ENST00000592333 PRR23AA6NEV1 266 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 SFI1A8K8P3 1242 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 STK25O00506 426 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 PLA2G4BP0C869 781 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 PTPN2P17706 415 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 NCKAP1LP55160 1127 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 ROR1Q01973 937 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 ANGPT1Q15389 498 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 SLC10A6Q3KNW5 377 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 FGF14Q92915 247 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 CALML4Q96GE6 196 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 BORCS6Q96GS4 357 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 CA14Q9ULX7 337 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 MYO15AQ9UKN7 3530 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 CITO14578 2027 aa20.6■□□□□ 0.89
CCDC43-205ENST00000592333 LRG1P02750 347 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 CLTAP09496 248 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 CYP3A5P20815 502 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 PAX3P23760 479 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 IGFBP6P24592 240 aaPredicted RBP20.59■□□□□ 0.89
CCDC43-205ENST00000592333 NTHL1P78549 312 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 PRKCQQ04759 706 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 ZRSR1Q15695 479 aaKnown RBP20.59■□□□□ 0.89
CCDC43-205ENST00000592333 PARM1Q6UWI2 310 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 BRAPQ7Z569 592 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 OSBPL6Q9BZF3 934 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 SMC3Q9UQE7 1217 aa20.59■□□□□ 0.89
CCDC43-205ENST00000592333 WDR27A2RRH5 827 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 XPOTO43592 962 aaKnown RBP20.58■□□□□ 0.89
CCDC43-205ENST00000592333 ECI2O75521 394 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 LRPAP1P30533 357 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 LONP1P36776 959 aaKnown RBP20.58■□□□□ 0.89
CCDC43-205ENST00000592333 UBA7P41226 1012 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 GPC5P78333 572 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 ZNF280DQ6N043 979 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 HAUS6Q7Z4H7 955 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 NPAS3Q8IXF0 933 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 LEMD2Q8NC56 503 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 ITFG1Q8TB96 612 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 ZBTB45Q96K62 511 aaPredicted RBP20.58■□□□□ 0.89
CCDC43-205ENST00000592333 DLGAP2Q9P1A6 1054 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 ANKFY1Q9P2R3 1169 aa20.58■□□□□ 0.89
CCDC43-205ENST00000592333 MRPS23Q9Y3D9 190 aaKnown RBP20.58■□□□□ 0.89
CCDC43-205ENST00000592333 TTC26A0AVF1 554 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 I3L4J1 428 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 PRRG1O14668 218 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 ZNF197O14709 1029 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 PIGRP01833 764 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 RHOP08100 348 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 ZNF131P52739 623 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 ARSHQ5FYA8 562 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 LARP1BQ659C4 914 aaKnown RBP20.57■□□□□ 0.88
CCDC43-205ENST00000592333 ASCL5Q7RTU5 278 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 CD302Q8IX05 232 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 DDX23Q9BUQ8 820 aaKnown RBP20.57■□□□□ 0.88
CCDC43-205ENST00000592333 FBXL5Q9UKA1 691 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 UBQLN1Q9UMX0 589 aaKnown RBP20.57■□□□□ 0.88
CCDC43-205ENST00000592333 PCDHB8Q9UN66 801 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 MYH11P35749 1972 aa20.57■□□□□ 0.88
CCDC43-205ENST00000592333 M0QZQ0 153 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 MEFVO15553 781 aaPredicted RBP20.56■□□□□ 0.88
CCDC43-205ENST00000592333 OAZ2O95190 189 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 ADRB2P07550 413 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 MARCKSP29966 332 aaPredicted RBP20.56■□□□□ 0.88
CCDC43-205ENST00000592333 MCM4P33991 863 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 MAGEA9P43362 315 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms