RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 ZDBF2Q9HCK1 2354 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 SMIM28A0A1B0GU29 152 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 PODXLO00592 558 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 PRRG1O14668 218 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 SYN3O14994 580 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 KCNE1P15382 129 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 NPR3P17342 541 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 TKTP29401 623 aaKnown RBP11.09□□□□□ -0.63
VMP1-214ENST00000592106 RPL9P32969 192 aaKnown RBP11.09□□□□□ -0.63
VMP1-214ENST00000592106 MATR3P43243 847 aaKnown RBP eCLIP11.09□□□□□ -0.63
VMP1-214ENST00000592106 MCM2P49736 904 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 TOB1P50616 345 aaPredicted RBP11.09□□□□□ -0.63
VMP1-214ENST00000592106 OSTNP61366 133 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 PFKPQ01813 784 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 NOLC1Q14978 699 aaKnown RBP eCLIP11.09□□□□□ -0.63
VMP1-214ENST00000592106 KYAT1Q16773 422 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 UPP1Q16831 310 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 C8orf34Q49A92 452 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 PABPC1LQ4VXU2 614 aaKnown RBP11.09□□□□□ -0.63
VMP1-214ENST00000592106 XKR4Q5GH76 650 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 HYIQ5T013 277 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 ARL6IP4Q66PJ3 421 aaKnown RBP11.09□□□□□ -0.63
VMP1-214ENST00000592106 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 C1orf186Q6ZWK4 172 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 DAW1Q8N136 415 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 ELMOD1Q8N336 334 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 CEP120Q8N960 986 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 GPR152Q8TDT2 470 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 SPIRE2Q8WWL2 714 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 BICD1Q96G01 975 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 RUSC1Q9BVN2 902 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 TARS2Q9BW92 718 aaKnown RBP11.09□□□□□ -0.63
VMP1-214ENST00000592106 GOLGA2P5Q9HBQ8 144 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 POLD4Q9HCU8 107 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 CNTN3Q9P232 1028 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 LARSQ9P2J5 1176 aaKnown RBP11.09□□□□□ -0.63
VMP1-214ENST00000592106 ANKFY1Q9P2R3 1169 aa11.09□□□□□ -0.63
VMP1-214ENST00000592106 VWA8A3KMH1 1905 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 KRBA1A5PL33 1030 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 PRR23AA6NEV1 266 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 PP2D1A8MPX8 630 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 SLC16A4O15374 487 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 XPOTO43592 962 aaKnown RBP11.08□□□□□ -0.64
VMP1-214ENST00000592106 TOM1L1O75674 476 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 BMP15O95972 392 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 PLS3P13797 630 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 SCP2P22307 547 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 PROZP22891 400 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 MCM4P33991 863 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 BRCC3P46736 316 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
VMP1-214ENST00000592106 ZC3H14Q6PJT7 736 aaKnown RBP11.08□□□□□ -0.64
VMP1-214ENST00000592106 SYT2Q8N9I0 419 aaPredicted RBP11.08□□□□□ -0.64
VMP1-214ENST00000592106 APPL2Q8NEU8 664 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 FGF13Q92913 245 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 CALML4Q96GE6 196 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 AK8Q96MA6 479 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 KIF2CQ99661 725 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 CXCL16Q9H2A7 254 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 PTPRHQ9HD43 1115 aa11.08□□□□□ -0.64
VMP1-214ENST00000592106 MRPS23Q9Y3D9 190 aaKnown RBP11.08□□□□□ -0.64
VMP1-214ENST00000592106 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
VMP1-214ENST00000592106 DOCK8Q8NF50 2099 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 VWA3AA6NCI4 1184 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 ZNF197O14709 1029 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 CLDN3O15551 220 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 ADAM12O43184 909 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 PI15O43692 258 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 PLA2G4BP0C869 781 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 GJB2P29033 226 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 CDC25AP30304 524 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 ABCD1P33897 745 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 MAGEA9P43362 315 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 NTHL1P78549 312 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 ROR1Q01973 937 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 PRKCQQ04759 706 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 MAPK7Q13164 816 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 SLC8B1Q6J4K2 584 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 ALKAL1Q6UXT8 129 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 ZPBP2Q6X784 338 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 ASCL5Q7RTU5 278 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 TAS1R3Q7RTX0 852 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 FRMD5Q7Z6J6 570 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 NTPCRQ9BSD7 190 aaKnown RBP11.07□□□□□ -0.64
VMP1-214ENST00000592106 OXCT2Q9BYC2 517 aaPredicted RBP11.07□□□□□ -0.64
VMP1-214ENST00000592106 SEMA4AQ9H3S1 761 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 ODF2LQ9ULJ1 636 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 SIT1Q9Y3P8 196 aa11.07□□□□□ -0.64
VMP1-214ENST00000592106 CITO14578 2027 aa11.06□□□□□ -0.64
VMP1-214ENST00000592106 ARHGEF37A1IGU5 675 aa11.06□□□□□ -0.64
VMP1-214ENST00000592106 I3L4J1 428 aa11.06□□□□□ -0.64
VMP1-214ENST00000592106 RHOP08100 348 aa11.06□□□□□ -0.64
VMP1-214ENST00000592106 CLTAP09496 248 aa11.06□□□□□ -0.64
VMP1-214ENST00000592106 CPB1P15086 417 aa11.06□□□□□ -0.64
VMP1-214ENST00000592106 PTPN2P17706 415 aa11.06□□□□□ -0.64
VMP1-214ENST00000592106 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
VMP1-214ENST00000592106 UBA7P41226 1012 aa11.06□□□□□ -0.64
VMP1-214ENST00000592106 LIG4P49917 911 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms