RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 FAM171A1Q5VUB5 890 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 LILRA6Q6PI73 481 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 PRSS55Q6UWB4 352 aaPredicted RBP15.17■□□□□ 0.02
CLIP3-205ENST00000592017 SYCP3Q8IZU3 236 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 FSIP1Q8NA03 581 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 CMASQ8NFW8 434 aaPredicted RBP15.17■□□□□ 0.02
CLIP3-205ENST00000592017 POMGNT1Q8WZA1 660 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 ZMAT2Q96NC0 199 aaKnown RBP15.17■□□□□ 0.02
CLIP3-205ENST00000592017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLIP3-205ENST00000592017 SLC38A7Q9NVC3 462 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 CNTN3Q9P232 1028 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 FNIP2Q9P278 1114 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 EXOC7Q9UPT5 735 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 NR2E1Q9Y466 385 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 PCDHB13Q9Y5F0 798 aa15.17■□□□□ 0.02
CLIP3-205ENST00000592017 MYH11P35749 1972 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 A0A0B4J269 797 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 TMEM221A6NGB7 291 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 M0R296 226 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 TGM5O43548 720 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 ACTN4O43707 911 aaKnown RBP15.16■□□□□ 0.02
CLIP3-205ENST00000592017 RFPL2O75678 378 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 PRPF6O94906 941 aaKnown RBP15.16■□□□□ 0.02
CLIP3-205ENST00000592017 GLUD1P00367 558 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
CLIP3-205ENST00000592017 CLCNKBP51801 687 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 SOX4Q06945 474 aaPredicted RBP15.16■□□□□ 0.02
CLIP3-205ENST00000592017 CUL4BQ13620 913 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 ALCAMQ13740 583 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 SLC10A6Q3KNW5 377 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 SLFN12LQ6IEE8 588 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 STXBP4Q6ZWJ1 553 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 GLIS3Q8NEA6 775 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 LNX1Q8TBB1 728 aaPredicted RBP15.16■□□□□ 0.02
CLIP3-205ENST00000592017 C18orf25Q96B23 403 aaPredicted RBP15.16■□□□□ 0.02
CLIP3-205ENST00000592017 KIF12Q96FN5 646 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 C7orf25Q9BPX7 421 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 CLSTN3Q9BQT9 956 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 TTPALQ9BTX7 342 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 STRA6Q9BX79 667 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 RPF1Q9H9Y2 349 aaKnown RBP15.16■□□□□ 0.02
CLIP3-205ENST00000592017 HCN4Q9Y3Q4 1203 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 TECTAO75443 2155 aa15.16■□□□□ 0.02
CLIP3-205ENST00000592017 MUC6Q6W4X9 2439 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 CCDC195A0A1B0GUA6 201 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 PODXLO00592 558 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 ADAM12O43184 909 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 B3GAT3O94766 335 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 C1RP00736 705 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 SLFN14P0C7P3 912 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 KCNE1P15382 129 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 SYKP43405 635 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 ACOT2P49753 483 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 NDUFA8P51970 172 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 ENOX2Q16206 610 aaKnown RBP15.15■□□□□ 0.02
CLIP3-205ENST00000592017 KYAT1Q16773 422 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 UPP1Q16831 310 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 FAM26FQ5R3K3 315 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 DCLRE1AQ6PJP8 1040 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 UNC13DQ70J99 1090 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 CEP57Q86XR8 500 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 GLYCTKQ8IVS8 523 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 ZDHHC14Q8IZN3 488 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 KREMEN2Q8NCW0 462 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 NOC3LQ8WTT2 800 aaKnown RBP15.15■□□□□ 0.02
CLIP3-205ENST00000592017 PIK3R5Q8WYR1 880 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 ZNF707Q96C28 371 aaPredicted RBP15.15■□□□□ 0.02
CLIP3-205ENST00000592017 PAGE5Q96GU1 130 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 UROC1Q96N76 676 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 GOLPH3LQ9H4A5 285 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 TUBGCP4Q9UGJ1 667 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 LIMD1Q9UGP4 676 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 AGO2Q9UKV8 859 aaKnown RBP15.15■□□□□ 0.02
CLIP3-205ENST00000592017 HPSEQ9Y251 543 aa15.15■□□□□ 0.02
CLIP3-205ENST00000592017 ARIH1Q9Y4X5 557 aaPredicted RBP15.15■□□□□ 0.02
CLIP3-205ENST00000592017 TDRD15B5MCY1 1934 aaKnown RBP15.14■□□□□ 0.01
CLIP3-205ENST00000592017 A0A1W2PQ27 194 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 A0A1W2PQ64 194 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 A0A1W2PQD8 194 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 LACTBL1A8MY62 500 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 TMEM189-UBE2V1I3L0A0 370 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 FAM189A1O60320 539 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 PAPLNO95428 1278 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 ASGR2P07307 311 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 FGFR3P22607 806 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 CNNM4Q6P4Q7 775 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 C15orf39Q6ZRI6 1047 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 BMP8AQ7Z5Y6 402 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 TMEM130Q8N3G9 435 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 TDRD5Q8NAT2 981 aaKnown RBP15.14■□□□□ 0.01
CLIP3-205ENST00000592017 C3orf58Q8NDZ4 430 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 HDAC7Q8WUI4 952 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 SAAL1Q96ER3 474 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 SMOC2Q9H3U7 446 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 TMEM206Q9H813 350 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 PLEKHA5Q9HAU0 1116 aa15.14■□□□□ 0.01
CLIP3-205ENST00000592017 CPSF3Q9UKF6 684 aaKnown RBP15.14■□□□□ 0.01
CLIP3-205ENST00000592017 USTQ9Y2C2 406 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms