RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 POLR2DO15514 142 aaKnown RBP29.65■■■□□ 2.34
SMAD4-213ENST00000591914 TGM5O43548 720 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 GCNT3O95395 438 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 WEE2P0C1S8 567 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 BRCC3P46736 316 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 AMPD3Q01432 767 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 ALCAMQ13740 583 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 ELMSAN1Q6PJG2 1045 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 GPR149Q86SP6 731 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 PALB2Q86YC2 1186 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 FEZF2Q8TBJ5 459 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 ACCSQ96QU6 501 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 TSPAN18Q96SJ8 248 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 FGFBP2Q9BYJ0 223 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 EXOC7Q9UPT5 735 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 PCDHB13Q9Y5F0 798 aa29.65■■■□□ 2.34
SMAD4-213ENST00000591914 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.65■■■□□ 2.34
SMAD4-213ENST00000591914 SPDYE4A6NLX3 237 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 MYBP10242 640 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 SPAG1Q07617 926 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 BECN1Q14457 450 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 ATAT1Q5SQI0 421 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 ADALQ6DHV7 355 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 C15orf39Q6ZRI6 1047 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 RNF135Q8IUD6 432 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 GLYCTKQ8IVS8 523 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 CMASQ8NFW8 434 aaPredicted RBP29.64■■■□□ 2.34
SMAD4-213ENST00000591914 KIF12Q96FN5 646 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 C1QTNF1Q9BXJ1 281 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 PLEKHA4Q9H4M7 779 aa29.64■■■□□ 2.34
SMAD4-213ENST00000591914 AGO2Q9UKV8 859 aaKnown RBP29.64■■■□□ 2.34
SMAD4-213ENST00000591914 MTCL1Q9Y4B5 1905 aaKnown RBP29.63■■■□□ 2.33
SMAD4-213ENST00000591914 I3L4J1 428 aa29.63■■■□□ 2.33
SMAD4-213ENST00000591914 PAPLNO95428 1278 aa29.63■■■□□ 2.33
SMAD4-213ENST00000591914 TKTP29401 623 aaKnown RBP29.63■■■□□ 2.33
SMAD4-213ENST00000591914 ADSSP30520 456 aa29.63■■■□□ 2.33
SMAD4-213ENST00000591914 KRT85P78386 507 aa29.63■■■□□ 2.33
SMAD4-213ENST00000591914 CD302Q8IX05 232 aa29.63■■■□□ 2.33
SMAD4-213ENST00000591914 LEO1Q8WVC0 666 aaPredicted RBP29.63■■■□□ 2.33
SMAD4-213ENST00000591914 CHAMP1Q96JM3 812 aa29.63■■■□□ 2.33
SMAD4-213ENST00000591914 MTRRQ9UBK8 725 aa29.63■■■□□ 2.33
SMAD4-213ENST00000591914 UBQLN1Q9UMX0 589 aaKnown RBP29.63■■■□□ 2.33
SMAD4-213ENST00000591914 DCXO43602 365 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 SPATA31D3P0C874 917 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 ALADP13716 330 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 CYP3A5P20815 502 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 LRPAP1P30533 357 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 ACOT2P49753 483 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 POSTNQ15063 836 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 SPATA31D4Q6ZUB0 917 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 C7orf25Q9BPX7 421 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 KCNH3Q9ULD8 1083 aa29.62■■■□□ 2.33
SMAD4-213ENST00000591914 DENND4AQ7Z401 1863 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 POU5F1Q01860 360 aaKnown RBP29.61■■■□□ 2.33
SMAD4-213ENST00000591914 ANKS3Q6ZW76 656 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 POMGNT1Q8WZA1 660 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 SPATA32Q96LK8 384 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 PYM1Q9BRP8 204 aaKnown RBP29.61■■■□□ 2.33
SMAD4-213ENST00000591914 RHOBTB2Q9BYZ6 727 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 NUB1Q9Y5A7 615 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 ATP6V1DQ9Y5K8 247 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 BACE2Q9Y5Z0 518 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 C2orf16Q68DN1 1984 aa29.61■■■□□ 2.33
SMAD4-213ENST00000591914 ADAM12O43184 909 aa29.6■■■□□ 2.33
SMAD4-213ENST00000591914 XPOTO43592 962 aaKnown RBP29.6■■■□□ 2.33
SMAD4-213ENST00000591914 ASIC1P78348 528 aa29.6■■■□□ 2.33
SMAD4-213ENST00000591914 CYP26C1Q6V0L0 522 aa29.6■■■□□ 2.33
SMAD4-213ENST00000591914 TMEM130Q8N3G9 435 aa29.6■■■□□ 2.33
SMAD4-213ENST00000591914 KREMEN2Q8NCW0 462 aa29.6■■■□□ 2.33
SMAD4-213ENST00000591914 SUSD3Q96L08 255 aa29.6■■■□□ 2.33
SMAD4-213ENST00000591914 FBXW11Q9UKB1 542 aa29.6■■■□□ 2.33
SMAD4-213ENST00000591914 NR2E1Q9Y466 385 aa29.6■■■□□ 2.33
SMAD4-213ENST00000591914 ANK1P16157 1881 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 CCDC195A0A1B0GUA6 201 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 SYN3O14994 580 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 RFPL2O75678 378 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 JADE1Q6IE81 842 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 CRELD2Q6UXH1 353 aaPredicted RBP29.59■■■□□ 2.33
SMAD4-213ENST00000591914 HPS3Q969F9 1004 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 FAM212AQ96EL1 285 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 ASB7Q9H672 318 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 TMEM206Q9H813 350 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 ZDHHC7Q9NXF8 308 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 MUTYHQ9UIF7 546 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 DERAQ9Y315 318 aa29.59■■■□□ 2.33
SMAD4-213ENST00000591914 CMA1P23946 247 aa29.58■■■□□ 2.33
SMAD4-213ENST00000591914 OR1D2P34982 312 aa29.58■■■□□ 2.33
SMAD4-213ENST00000591914 RAB33AQ14088 237 aa29.58■■■□□ 2.33
SMAD4-213ENST00000591914 SPATA1Q5VX52 437 aa29.58■■■□□ 2.33
SMAD4-213ENST00000591914 RSPO2Q6UXX9 243 aaPredicted RBP29.58■■■□□ 2.33
SMAD4-213ENST00000591914 SYCP3Q8IZU3 236 aa29.58■■■□□ 2.33
SMAD4-213ENST00000591914 GLIS3Q8NEA6 775 aa29.58■■■□□ 2.33
SMAD4-213ENST00000591914 ZNF707Q96C28 371 aaPredicted RBP29.58■■■□□ 2.33
SMAD4-213ENST00000591914 C11orf16Q9NQ32 467 aa29.58■■■□□ 2.33
SMAD4-213ENST00000591914 TSHZ2Q9NRE2 1034 aa29.58■■■□□ 2.33
SMAD4-213ENST00000591914 TRIOO75962 3097 aa29.57■■■□□ 2.32
SMAD4-213ENST00000591914 PRPF6O94906 941 aaKnown RBP29.57■■■□□ 2.32
SMAD4-213ENST00000591914 NFICP08651 508 aa29.57■■■□□ 2.32
SMAD4-213ENST00000591914 GARTP22102 1010 aa29.57■■■□□ 2.32
SMAD4-213ENST00000591914 SP100P23497 879 aaPredicted RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms