RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239		A0A1W2PQD8	194 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	TNFRSF10A	O00220	468 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	PODXL	O00592	558 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	TRAPPC3	O43617	180 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	PRPF6	O94906	941 aa	Known RBP	10	□□□□□ -0.81
DNMT1-223	ENST00000591239	ADH1A	P07327	375 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	SYK	P43405	635 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	NDUFA8	P51970	172 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	SPAG1	Q07617	926 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	EHHADH	Q08426	723 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	CUL4B	Q13620	913 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	ZBTB6	Q15916	424 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	TPRN	Q4KMQ1	711 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	RTP2	Q5QGT7	225 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	FAM26F	Q5R3K3	315 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	SYCE2	Q6PIF2	218 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	CD300LG	Q6UXG3	332 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	STXBP4	Q6ZWJ1	553 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	UNC13D	Q70J99	1090 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	CEP57	Q86XR8	500 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	CD302	Q8IX05	232 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	C3orf58	Q8NDZ4	430 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	GLIS3	Q8NEA6	775 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	FAM212A	Q96EL1	285 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	PAGE5	Q96GU1	130 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	TSPAN18	Q96SJ8	248 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	TMEM206	Q9H813	350 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10	□□□□□ -0.81
DNMT1-223	ENST00000591239	DZANK1	Q9NVP4	752 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	FNIP2	Q9P278	1114 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	PRKAG3	Q9UGI9	489 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	TUBGCP4	Q9UGJ1	667 aa		10	□□□□□ -0.81
DNMT1-223	ENST00000591239	USP15	Q9Y4E8	981 aa	Predicted RBP	10	□□□□□ -0.81
DNMT1-223	ENST00000591239	PVALEF	A0A1B0GWK0	134 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239		I3L4J1	428 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	EIF3D	O15371	548 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	RPL17	P18621	184 aa	Known RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	CYP3A5	P20815	502 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	GART	P22102	1010 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	HOXD13	P35453	343 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	BRCC3	P46736	316 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	POU5F1	Q01860	360 aa	Known RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	CREM	Q03060	361 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	ITIH3	Q06033	890 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	JADE1	Q6IE81	842 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	PRSS55	Q6UWB4	352 aa	Predicted RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	CRELD2	Q6UXH1	353 aa	Predicted RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	EPM2AIP1	Q7L775	607 aa	Predicted RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	GLYCTK	Q8IVS8	523 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	ADHFE1	Q8IWW8	467 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	TMEM130	Q8N3G9	435 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	FSIP1	Q8NA03	581 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	LNX1	Q8TBB1	728 aa	Predicted RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	PIK3R5	Q8WYR1	880 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	SUSD6	Q92537	303 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	FBXL18	Q96ME1	805 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	FAM213A	Q9BRX8	229 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	APOL5	Q9BWW9	433 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	GOLPH3L	Q9H4A5	285 aa		9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	UBQLN1	Q9UMX0	589 aa	Known RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	9.99	□□□□□ -0.81
DNMT1-223	ENST00000591239	TGM5	O43548	720 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	XPOT	O43592	962 aa	Known RBP	9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	KLRC4	O43908	158 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	LDHA	P00338	332 aa	Known RBP	9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	GLUD1	P00367	558 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	C1R	P00736	705 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	MYL1	P05976	194 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	NFIC	P08651	508 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	FGFR3	P22607	806 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	TKT	P29401	623 aa	Known RBP	9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	LRPAP1	P30533	357 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	ZP2	Q05996	745 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	CBX2	Q14781	532 aa	Predicted RBP	9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	TMEM132D	Q14C87	1099 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	PSMD5	Q16401	504 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	RARS2	Q5T160	578 aa	Known RBP	9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	SPATA1	Q5VX52	437 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	CES5A	Q6NT32	575 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	KANK3	Q6NY19	840 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	ARMCX5	Q6P1M9	558 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	PDXDC1	Q6P996	788 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	PALB2	Q86YC2	1186 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	GJD3	Q8N144	294 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	C12orf76	Q8N812	135 aa	Predicted RBP	9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	ZSWIM2	Q8NEG5	633 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	BEST2	Q8NFU1	509 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	ZNF507	Q8TCN5	953 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	SAAL1	Q96ER3	474 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	SUSD3	Q96L08	255 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	CLSTN3	Q9BQT9	956 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	CBWD1	Q9BRT8	395 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	ADAM7	Q9H2U9	754 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	PCIF1	Q9H4Z3	704 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	ASB7	Q9H672	318 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	SLC39A2	Q9NP94	309 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	CD320	Q9NPF0	282 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	MAN1C1	Q9NR34	630 aa		9.98	□□□□□ -0.81
DNMT1-223	ENST00000591239	DPP7	Q9UHL4	492 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms